Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
LDB2O43679 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
LDB2O43679 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LDB2O43679 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LDB2O43679 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
LDB2O43679 AC020633.1-201ENST00000468439 2247 ntBASIC5.16□□□□□ -1.58
LDB2O43679 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LDB2O43679 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
LDB2O43679 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.16□□□□□ -1.58
LDB2O43679 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LDB2O43679 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
LDB2O43679 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LDB2O43679 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LDB2O43679 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
LDB2O43679 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
LDB2O43679 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LDB2O43679 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
LDB2O43679 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LDB2O43679 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.15□□□□□ -1.58
LDB2O43679 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
LDB2O43679 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.15□□□□□ -1.58
LDB2O43679 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LDB2O43679 MTCO1P7-201ENST00000419523 1542 ntBASIC5.15□□□□□ -1.58
LDB2O43679 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
LDB2O43679 AC010132.2-201ENST00000295493 1043 ntBASIC5.15□□□□□ -1.59
LDB2O43679 SNORA17.1-201ENST00000362945 126 ntBASIC5.15□□□□□ -1.59
LDB2O43679 RNU6-354P-201ENST00000383862 107 ntBASIC5.15□□□□□ -1.59
LDB2O43679 RNU6-610P-201ENST00000384264 107 ntBASIC5.15□□□□□ -1.59
LDB2O43679 ANAPC10P1-201ENST00000395991 556 ntBASIC5.15□□□□□ -1.59
LDB2O43679 HMGB3P19-201ENST00000403971 560 ntBASIC5.15□□□□□ -1.59
LDB2O43679 AL355615.1-201ENST00000406187 641 ntBASIC5.15□□□□□ -1.59
LDB2O43679 U3.32-201ENST00000408116 212 ntBASIC5.15□□□□□ -1.59
LDB2O43679 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.15□□□□□ -1.59
LDB2O43679 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.15□□□□□ -1.59
LDB2O43679 PCNPP4-201ENST00000414817 517 ntBASIC5.15□□□□□ -1.59
LDB2O43679 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.15□□□□□ -1.59
LDB2O43679 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.15□□□□□ -1.59
LDB2O43679 TCEA1P2-201ENST00000420496 906 ntBASIC5.15□□□□□ -1.59
LDB2O43679 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.15□□□□□ -1.59
LDB2O43679 BX119904.1-201ENST00000432026 348 ntBASIC5.15□□□□□ -1.59
LDB2O43679 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.15□□□□□ -1.59
LDB2O43679 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.15□□□□□ -1.59
LDB2O43679 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.15□□□□□ -1.59
LDB2O43679 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.15□□□□□ -1.59
LDB2O43679 CNOT7P2-201ENST00000441051 832 ntBASIC5.15□□□□□ -1.59
LDB2O43679 EEF1B2P5-201ENST00000444820 548 ntBASIC5.15□□□□□ -1.59
LDB2O43679 FAR2P1-206ENST00000449736 709 ntBASIC5.15□□□□□ -1.59
LDB2O43679 AC005532.2-201ENST00000467154 373 ntBASIC5.15□□□□□ -1.59
LDB2O43679 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.15□□□□□ -1.59
LDB2O43679 SUMO1P1-201ENST00000497904 306 ntBASIC5.15□□□□□ -1.59
LDB2O43679 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.15□□□□□ -1.59
LDB2O43679 AC069306.1-201ENST00000507006 843 ntBASIC5.15□□□□□ -1.59
LDB2O43679 AC147055.3-201ENST00000510547 851 ntBASIC5.15□□□□□ -1.59
LDB2O43679 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.15□□□□□ -1.59
LDB2O43679 Y_RNA.717-201ENST00000517106 92 ntBASIC5.15□□□□□ -1.59
LDB2O43679 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
LDB2O43679 AC034205.1-201ENST00000520621 638 ntBASIC5.15□□□□□ -1.59
LDB2O43679 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.15□□□□□ -1.59
LDB2O43679 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.15□□□□□ -1.59
LDB2O43679 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.15□□□□□ -1.59
LDB2O43679 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.15□□□□□ -1.59
LDB2O43679 MTATP6P24-201ENST00000576835 677 ntBASIC5.15□□□□□ -1.59
LDB2O43679 AL445435.1-201ENST00000604232 665 ntBASIC5.15□□□□□ -1.59
LDB2O43679 AC124016.2-201ENST00000610058 665 ntBASIC5.15□□□□□ -1.59
LDB2O43679 AC126915.2-201ENST00000610957 190 ntBASIC5.15□□□□□ -1.59
LDB2O43679 AL121612.2-201ENST00000612261 482 ntBASIC5.15□□□□□ -1.59
LDB2O43679 AC037198.3-201ENST00000616754 526 ntBASIC5.15□□□□□ -1.59
LDB2O43679 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LDB2O43679 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.15□□□□□ -1.59
LDB2O43679 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.15□□□□□ -1.59
LDB2O43679 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.15□□□□□ -1.59
LDB2O43679 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.15□□□□□ -1.59
LDB2O43679 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.15□□□□□ -1.59
LDB2O43679 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.59
LDB2O43679 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LDB2O43679 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
LDB2O43679 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
LDB2O43679 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
LDB2O43679 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LDB2O43679 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.15□□□□□ -1.59
LDB2O43679 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LDB2O43679 CASC19-221ENST00000641309 1382 ntBASIC5.15□□□□□ -1.59
LDB2O43679 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LDB2O43679 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.15□□□□□ -1.59
LDB2O43679 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LDB2O43679 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LDB2O43679 AC011755.1-201ENST00000623763 2049 ntBASIC5.14□□□□□ -1.59
LDB2O43679 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LDB2O43679 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LDB2O43679 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
LDB2O43679 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LDB2O43679 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LDB2O43679 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LDB2O43679 RNU5E-10P-201ENST00000363506 118 ntBASIC5.14□□□□□ -1.59
LDB2O43679 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LDB2O43679 RPL22P22-201ENST00000395439 379 ntBASIC5.14□□□□□ -1.59
LDB2O43679 AL035079.1-201ENST00000405210 287 ntBASIC5.14□□□□□ -1.59
LDB2O43679 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.14□□□□□ -1.59
LDB2O43679 BTF3P9-201ENST00000418784 283 ntBASIC5.14□□□□□ -1.59
LDB2O43679 AC007394.1-201ENST00000421941 531 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms