Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC8.11□□□□□ -1.11
CUX2O14529 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CUX2O14529 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC8.11□□□□□ -1.11
CUX2O14529 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CUX2O14529 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CUX2O14529 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC8.11□□□□□ -1.11
CUX2O14529 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CUX2O14529 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
CUX2O14529 AP001002.1-201ENST00000625148 1513 ntBASIC8.11□□□□□ -1.11
CUX2O14529 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CUX2O14529 RNA5SP513-201ENST00000364648 118 ntBASIC8.11□□□□□ -1.11
CUX2O14529 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CUX2O14529 MIR659-201ENST00000384963 97 ntBASIC8.11□□□□□ -1.11
CUX2O14529 AL035079.1-201ENST00000405210 287 ntBASIC8.11□□□□□ -1.11
CUX2O14529 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC8.11□□□□□ -1.11
CUX2O14529 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC8.11□□□□□ -1.11
CUX2O14529 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CUX2O14529 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC8.11□□□□□ -1.11
CUX2O14529 AL357559.1-201ENST00000622228 274 ntBASIC8.11□□□□□ -1.11
CUX2O14529 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CUX2O14529 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC8.11□□□□□ -1.11
CUX2O14529 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC8.11□□□□□ -1.11
CUX2O14529 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CUX2O14529 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CUX2O14529 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
CUX2O14529 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CUX2O14529 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CUX2O14529 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CUX2O14529 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CUX2O14529 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CUX2O14529 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CUX2O14529 OR8G2P-201ENST00000412796 908 ntBASIC8.1□□□□□ -1.11
CUX2O14529 GLUD1P9-201ENST00000420997 1173 ntBASIC8.1□□□□□ -1.11
CUX2O14529 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC8.1□□□□□ -1.11
CUX2O14529 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CUX2O14529 AC108463.1-201ENST00000450258 347 ntBASIC8.1□□□□□ -1.11
CUX2O14529 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC8.1□□□□□ -1.11
CUX2O14529 CARD16-203ENST00000525374 503 ntTSL 3 BASIC8.1□□□□□ -1.11
CUX2O14529 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC8.1□□□□□ -1.11
CUX2O14529 AC053481.4-201ENST00000583164 216 ntBASIC8.1□□□□□ -1.11
CUX2O14529 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CUX2O14529 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CUX2O14529 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CUX2O14529 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CUX2O14529 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CUX2O14529 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC8.1□□□□□ -1.11
CUX2O14529 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CUX2O14529 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CUX2O14529 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CUX2O14529 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
CUX2O14529 AC011998.1-201ENST00000433403 117 ntBASIC8.09□□□□□ -1.11
CUX2O14529 FTH1P16-201ENST00000435241 552 ntBASIC8.09□□□□□ -1.11
CUX2O14529 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC8.09□□□□□ -1.11
CUX2O14529 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC8.09□□□□□ -1.11
CUX2O14529 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
CUX2O14529 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
CUX2O14529 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC8.09□□□□□ -1.11
CUX2O14529 TEX41-300ENST00000631048 69 ntTSL 5 BASIC8.09□□□□□ -1.11
CUX2O14529 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CUX2O14529 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CUX2O14529 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CUX2O14529 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC8.09□□□□□ -1.11
CUX2O14529 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CUX2O14529 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC8.09□□□□□ -1.12
CUX2O14529 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC8.09□□□□□ -1.12
CUX2O14529 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CUX2O14529 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.08□□□□□ -1.12
CUX2O14529 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC8.08□□□□□ -1.12
CUX2O14529 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CUX2O14529 PTMAP5-201ENST00000393073 333 ntBASIC8.08□□□□□ -1.12
CUX2O14529 TMSB10P2-201ENST00000416049 131 ntBASIC8.08□□□□□ -1.12
CUX2O14529 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC8.08□□□□□ -1.12
CUX2O14529 RPS29P7-201ENST00000439662 171 ntBASIC8.08□□□□□ -1.12
CUX2O14529 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC8.08□□□□□ -1.12
CUX2O14529 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CUX2O14529 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC8.08□□□□□ -1.12
CUX2O14529 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC8.08□□□□□ -1.12
CUX2O14529 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC8.08□□□□□ -1.12
CUX2O14529 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC8.08□□□□□ -1.12
CUX2O14529 MIR6867-201ENST00000610636 67 ntBASIC8.08□□□□□ -1.12
CUX2O14529 AC020978.9-201ENST00000624380 1141 ntBASIC8.08□□□□□ -1.12
CUX2O14529 LDHA-225ENST00000625635 141 ntTSL 5 BASIC8.08□□□□□ -1.12
CUX2O14529 RNF123-214ENST00000629802 207 ntTSL 5 BASIC8.08□□□□□ -1.12
CUX2O14529 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CUX2O14529 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
CUX2O14529 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CUX2O14529 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CUX2O14529 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CUX2O14529 AC107068.1-201ENST00000563286 4218 ntBASIC8.08□□□□□ -1.12
CUX2O14529 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CUX2O14529 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC8.07□□□□□ -1.12
CUX2O14529 TPT1P2-201ENST00000413105 503 ntBASIC8.07□□□□□ -1.12
CUX2O14529 AL035246.1-201ENST00000433554 1255 ntBASIC8.07□□□□□ -1.12
CUX2O14529 AL157884.3-201ENST00000448273 1184 ntBASIC8.07□□□□□ -1.12
CUX2O14529 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC8.07□□□□□ -1.12
CUX2O14529 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC8.07□□□□□ -1.12
CUX2O14529 RN7SL290P-201ENST00000578661 300 ntBASIC8.07□□□□□ -1.12
CUX2O14529 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC8.07□□□□□ -1.12
CUX2O14529 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CUX2O14529 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 400.5 ms