Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC006427.1-201ENST00000514359 712 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 SOX5P1-201ENST00000524155 1127 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 AP000619.2-201ENST00000546014 969 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 GLRXP2-201ENST00000555594 321 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 AC084759.1-201ENST00000561168 290 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 AC087783.2-201ENST00000605070 562 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 MIR6839-201ENST00000620425 113 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 AL353662.3-201ENST00000625131 237 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 CASC19-281ENST00000642118 1554 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AC090220.1-201ENST00000593078 1699 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AP001029.2-203ENST00000589795 4910 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 RNU6-1251P-201ENST00000364502 107 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 RNU4-4P-201ENST00000364588 130 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 RNA5SP90-201ENST00000364801 99 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 SNORA5.1-201ENST00000384275 131 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 SNORD65-201ENST00000391079 73 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AC106883.1-201ENST00000418805 562 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 OR5M12P-201ENST00000423388 929 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 HSPD1P12-201ENST00000429127 1069 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 RBMY2QP-201ENST00000429799 1147 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 RPS29P10-201ENST00000439197 166 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AL627224.1-201ENST00000448334 444 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 RPS3AP53-201ENST00000454716 778 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 RPS3AP41-201ENST00000462701 778 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 PPM1AP1-201ENST00000502740 1135 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 UBE2V1P12-201ENST00000503954 474 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 GTF2F2P1-201ENST00000511083 675 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AC004923.2-201ENST00000529649 369 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 TAS2R6P-201ENST00000605022 826 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AC005084.1-201ENST00000605160 304 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AC026741.1-201ENST00000605892 482 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AL121652.1-201ENST00000608851 448 ntBASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RAI2Q9Y5P3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RAI2Q9Y5P3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAI2Q9Y5P3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAI2Q9Y5P3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAI2Q9Y5P3 AC100871.1-201ENST00000507871 1456 ntBASIC5.27□□□□□ -1.57
RAI2Q9Y5P3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
RAI2Q9Y5P3 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.27□□□□□ -1.57
RAI2Q9Y5P3 AC004158.1-201ENST00000564508 4319 ntBASIC5.27□□□□□ -1.57
RAI2Q9Y5P3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RAI2Q9Y5P3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RAI2Q9Y5P3 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.27□□□□□ -1.57
RAI2Q9Y5P3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAI2Q9Y5P3 MIR600-201ENST00000385007 98 ntBASIC5.27□□□□□ -1.57
RAI2Q9Y5P3 GSTA12P-201ENST00000402398 508 ntBASIC5.27□□□□□ -1.57
RAI2Q9Y5P3 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms