Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 AP000866.6-201ENST00000638898 3579 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 RNU6-780P-201ENST00000391030 104 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 IL6-203ENST00000401651 539 ntTSL 2 BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 MIR1284-201ENST00000408337 120 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 HSPE1P22-201ENST00000456856 327 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 HMGN1P12-201ENST00000499125 195 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 ATP5LP3-201ENST00000514223 304 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 PAICSP4-201ENST00000517543 1253 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 CDC42P3-201ENST00000518493 633 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 OR6C73P-201ENST00000546432 358 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 MRPS21P8-201ENST00000569196 235 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 CTSLP2-201ENST00000580501 394 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 AC020914.6-201ENST00000594327 272 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 CR382285.1-202ENST00000604687 547 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 SDR42E1P1-201ENST00000611327 477 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 AC005899.7-201ENST00000618199 588 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 AL445264.1-201ENST00000621719 171 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 MIR6719-201ENST00000622428 87 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 AC112487.2-201ENST00000637950 304 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 AL354854.1-201ENST00000455940 1363 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 AC092725.2-201ENST00000567658 1389 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 AL034370.1-201ENST00000397254 1590 ntBASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
ZC3H4Q9UPT8 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 AL121949.2-201ENST00000403446 1548 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 RNU4-73P-201ENST00000363164 141 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 SNORA58B-201ENST00000364259 136 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 RNU6-452P-201ENST00000384406 107 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 RN7SKP62-201ENST00000384539 329 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 AL161909.1-201ENST00000397390 712 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 FAT1P1-201ENST00000406588 507 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 RNU6-248P-201ENST00000410720 107 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 RPS21P8-201ENST00000413365 247 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 AC109780.2-201ENST00000413467 845 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 BTF3L4P3-201ENST00000418879 476 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 LINC00993-201ENST00000420453 540 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 AC069157.1-201ENST00000421749 137 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 AC008850.1-201ENST00000427546 362 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 RPS4XP4-201ENST00000443195 763 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 HMGN1P36-201ENST00000446623 298 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 COX6CP18-201ENST00000448769 222 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 AC011476.1-201ENST00000466725 307 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 RBM43P1-201ENST00000476891 1081 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 LARP1BP2-201ENST00000486594 519 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 RPL19P11-201ENST00000495944 589 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 NDUFB4P2-201ENST00000509515 391 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 KHDC1P1-201ENST00000511053 508 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 IGKV2-19-201ENST00000518132 283 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 IGJP1-201ENST00000522682 475 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 OR4A45P-201ENST00000529954 901 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 AC125611.2-201ENST00000551907 647 ntBASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC7.97□□□□□ -1.13
ZC3H4Q9UPT8 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 293 ms