Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 FAM60CP-201ENST00000591086 664 ntBASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 AC108751.5-201ENST00000492880 1336 ntBASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
SHROOM4Q9ULL8 AC017079.1-201ENST00000333650 415 ntBASIC9.21□□□□□ -0.93
SHROOM4Q9ULL8 MAPRE1P3-201ENST00000435438 796 ntBASIC9.21□□□□□ -0.93
SHROOM4Q9ULL8 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC9.21□□□□□ -0.93
SHROOM4Q9ULL8 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC9.21□□□□□ -0.93
SHROOM4Q9ULL8 CR383656.1-201ENST00000484916 377 ntBASIC9.21□□□□□ -0.93
SHROOM4Q9ULL8 MED28P5-201ENST00000528254 438 ntBASIC9.21□□□□□ -0.93
SHROOM4Q9ULL8 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC9.21□□□□□ -0.93
SHROOM4Q9ULL8 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SHROOM4Q9ULL8 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
SHROOM4Q9ULL8 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 ZNF92P1Y-201ENST00000415010 1191 ntBASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 AC006065.1-201ENST00000422539 802 ntBASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 AL645608.4-201ENST00000423619 154 ntBASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 NPM1P18-201ENST00000434232 732 ntBASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 ARL2BPP10-201ENST00000446487 531 ntBASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 ZFRP1-201ENST00000457579 2970 ntBASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 SUMO2P4-201ENST00000504193 276 ntBASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 BUD31P1-201ENST00000521828 359 ntBASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 MIR3939-201ENST00000582614 106 ntBASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 AL352984.2-202ENST00000613699 155 ntBASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
SHROOM4Q9ULL8 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC9.2□□□□□ -0.94
SHROOM4Q9ULL8 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC9.2□□□□□ -0.94
SHROOM4Q9ULL8 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC9.2□□□□□ -0.94
SHROOM4Q9ULL8 AC007382.1-201ENST00000624376 2618 ntBASIC9.2□□□□□ -0.94
SHROOM4Q9ULL8 ATP5F1P2-201ENST00000398143 760 ntBASIC9.2□□□□□ -0.94
SHROOM4Q9ULL8 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SHROOM4Q9ULL8 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC9.2□□□□□ -0.94
SHROOM4Q9ULL8 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC9.2□□□□□ -0.94
SHROOM4Q9ULL8 RFPL4AP3-201ENST00000515267 345 ntBASIC9.2□□□□□ -0.94
SHROOM4Q9ULL8 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC9.2□□□□□ -0.94
SHROOM4Q9ULL8 AL121839.1-201ENST00000556233 1185 ntBASIC9.2□□□□□ -0.94
SHROOM4Q9ULL8 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC9.2□□□□□ -0.94
SHROOM4Q9ULL8 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC9.2□□□□□ -0.94
SHROOM4Q9ULL8 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC9.2□□□□□ -0.94
SHROOM4Q9ULL8 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SHROOM4Q9ULL8 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 AL359837.1-201ENST00000381357 287 ntBASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 AL392003.1-201ENST00000434394 243 ntBASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 AC117525.1-201ENST00000515228 503 ntBASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 AC067805.1-201ENST00000559344 470 ntBASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SHROOM4Q9ULL8 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 SMG1P6-201ENST00000532337 2930 ntBASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 ATG4AP1-201ENST00000416893 538 ntBASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 AL358176.3-201ENST00000420757 454 ntBASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 AL034379.1-201ENST00000423216 253 ntBASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 AP001324.1-201ENST00000428553 399 ntBASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 COX6CP13-201ENST00000428703 226 ntBASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 CBX1P1-201ENST00000440184 427 ntBASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 Z95327.1-201ENST00000446082 482 ntBASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 ATG10-AS1-201ENST00000504846 648 ntBASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 AP001781.1-201ENST00000530977 207 ntBASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 ARL6IP1P1-201ENST00000545836 610 ntBASIC9.18□□□□□ -0.94
SHROOM4Q9ULL8 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms