Protein–RNA interactions for Protein: Q9UKV5

AMFR, E3 ubiquitin-protein ligase AMFR, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMFRQ9UKV5 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AL355578.1-201ENST00000607405 1328 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AP005432.1-201ENST00000580891 3485 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AC023490.2-201ENST00000359859 470 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 SNORD56.4-201ENST00000363883 71 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 RNU6-906P-201ENST00000384700 70 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 HMGB1P10-201ENST00000395823 563 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AC104333.2-201ENST00000422630 192 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 TNPO1P1-201ENST00000423641 1138 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 PNRC2P1-201ENST00000423940 420 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AL161722.2-201ENST00000434731 981 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 CLUHP1-201ENST00000435012 1190 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 MTCYBP29-201ENST00000436327 1006 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 MTND2P22-201ENST00000444325 1033 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AC092155.2-201ENST00000454675 477 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 NDUFA5P5-201ENST00000468361 342 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 RPL7P40-201ENST00000481703 745 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AC113420.1-201ENST00000507903 571 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AC023824.3-201ENST00000569003 562 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 BNIP3P24-201ENST00000593398 557 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 DUXAP3-201ENST00000603616 594 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 Z82195.1-201ENST00000604558 398 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AP000648.2-201ENST00000624182 404 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 MIR1910-201ENST00000636955 80 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AC010266.2-201ENST00000564741 3255 ntBASIC5.54□□□□□ -1.52
AMFRQ9UKV5 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.54□□□□□ -1.52
AMFRQ9UKV5 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 AC100778.3-201ENST00000580060 1750 ntBASIC5.53□□□□□ -1.52
AMFRQ9UKV5 OR9K1P-202ENST00000641111 3217 ntBASIC5.53□□□□□ -1.52
AMFRQ9UKV5 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 MTHFD2P5-201ENST00000320415 844 ntBASIC5.53□□□□□ -1.52
AMFRQ9UKV5 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 RNA5SP122-201ENST00000384457 108 ntBASIC5.53□□□□□ -1.52
AMFRQ9UKV5 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 LYPLA1P3-201ENST00000402650 695 ntBASIC5.53□□□□□ -1.52
AMFRQ9UKV5 RNA5SP487-201ENST00000410186 122 ntBASIC5.53□□□□□ -1.52
AMFRQ9UKV5 AC007738.1-201ENST00000413892 348 ntBASIC5.53□□□□□ -1.52
AMFRQ9UKV5 SLC20A1P1-201ENST00000413906 956 ntBASIC5.53□□□□□ -1.52
AMFRQ9UKV5 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 AL449283.1-202ENST00000418249 604 ntBASIC5.53□□□□□ -1.52
AMFRQ9UKV5 MTCYBP7-201ENST00000419540 1134 ntBASIC5.53□□□□□ -1.52
AMFRQ9UKV5 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 KCTD9P1-201ENST00000430462 1167 ntBASIC5.53□□□□□ -1.52
AMFRQ9UKV5 SUMO2P3-201ENST00000438311 288 ntBASIC5.53□□□□□ -1.52
AMFRQ9UKV5 VN1R25P-201ENST00000443385 738 ntBASIC5.53□□□□□ -1.52
AMFRQ9UKV5 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 AC012512.1-201ENST00000446594 718 ntBASIC5.53□□□□□ -1.52
AMFRQ9UKV5 Z73417.1-201ENST00000447373 778 ntBASIC5.53□□□□□ -1.52
AMFRQ9UKV5 AC008280.2-201ENST00000455473 307 ntBASIC5.53□□□□□ -1.52
AMFRQ9UKV5 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
AMFRQ9UKV5 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms