Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 MRPL35P2-201ENST00000448009 511 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 FCF1P6-201ENST00000456841 595 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC016687.1-201ENST00000482574 353 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC116562.1-201ENST00000485355 781 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 MTATP6P9-201ENST00000515039 680 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC105031.1-201ENST00000518550 476 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 RPL23AP53-201ENST00000521854 457 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 BGLT3-201ENST00000564523 994 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC079148.1-201ENST00000565944 819 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC127024.5-201ENST00000580085 462 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 MIR4660-201ENST00000583549 74 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AL031320.1-201ENST00000604177 357 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC010424.2-201ENST00000607594 443 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC017076.1-201ENST00000607613 578 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC034229.4-201ENST00000607861 441 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC018645.2-201ENST00000609151 472 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 Mico1.1-201ENST00000611698 204 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AL163051.2-201ENST00000618976 735 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC091953.3-201ENST00000623220 236 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AP003499.2-201ENST00000624100 483 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AP000648.2-201ENST00000624182 404 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 SAMMSON-226ENST00000642089 1582 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC008758.3-201ENST00000507003 1829 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SIX4Q9UIU6 AC093909.5-201ENST00000621839 1799 ntBASIC5.27□□□□□ -1.57
SIX4Q9UIU6 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AC009643.2-201ENST00000603543 1448 ntBASIC5.26□□□□□ -1.57
SIX4Q9UIU6 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 RNU6-697P-201ENST00000363348 107 ntBASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 RBMY2KP-201ENST00000418221 992 ntBASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AC013429.2-201ENST00000418798 781 ntBASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AL645608.4-201ENST00000423619 154 ntBASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AC007559.1-201ENST00000428736 355 ntBASIC5.26□□□□□ -1.57
SIX4Q9UIU6 RPL35AP21-201ENST00000437667 333 ntBASIC5.26□□□□□ -1.57
SIX4Q9UIU6 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 RN7SL517P-201ENST00000462240 305 ntBASIC5.26□□□□□ -1.57
SIX4Q9UIU6 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 MIR4760-201ENST00000585040 80 ntBASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 BNIP3P32-201ENST00000600015 554 ntBASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AC005084.1-201ENST00000605160 304 ntBASIC5.26□□□□□ -1.57
SIX4Q9UIU6 OR51C1P-201ENST00000608504 942 ntBASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AC004948.1-201ENST00000609858 672 ntBASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AC104763.3-201ENST00000613765 618 ntBASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AC019206.1-201ENST00000621938 425 ntBASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 CDC27P2-201ENST00000425026 1922 ntBASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AC011503.2-201ENST00000594230 1500 ntBASIC5.26□□□□□ -1.57
SIX4Q9UIU6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.26□□□□□ -1.57
SIX4Q9UIU6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 HSPA8P19-201ENST00000505359 1517 ntBASIC5.25□□□□□ -1.57
SIX4Q9UIU6 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SIX4Q9UIU6 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms