Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 COX6CP5-201ENST00000527162 228 ntBASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 PHBP17-201ENST00000528576 541 ntBASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 AL845331.3-202ENST00000562856 261 ntBASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 AC011193.2-201ENST00000582638 367 ntBASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 RN7SL778P-201ENST00000607160 297 ntBASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 AL121809.2-201ENST00000613169 341 ntBASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 AC068831.8-201ENST00000620171 435 ntBASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 AC129778.1-202ENST00000623812 261 ntBASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 AC091905.1-201ENST00000624400 311 ntBASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 AC110994.2-201ENST00000635481 492 ntBASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 AL591379.1-207ENST00000635982 261 ntBASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 AC021242.1-201ENST00000507315 2035 ntBASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 AC107980.1-201ENST00000558671 3355 ntBASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 DDX18P4-201ENST00000511690 1966 ntBASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.04□□□□□ -1.28
CUEDC1Q9NWM3 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AC093311.1-201ENST00000506586 2021 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AC092821.2-201ENST00000545710 2042 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AC004014.2-201ENST00000623718 5122 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 Y_RNA.387-201ENST00000383918 102 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AL353678.1-201ENST00000422735 741 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AL445669.1-201ENST00000426743 755 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 Z82205.1-201ENST00000428456 297 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 RPL7P56-201ENST00000429441 717 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AL731563.1-201ENST00000442202 214 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AC023274.2-201ENST00000445264 521 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 NDUFA5P7-201ENST00000452914 242 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 RNU6-420P-201ENST00000458780 107 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 RPSAP24-201ENST00000461543 873 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 HMGN2P25-201ENST00000486956 268 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 RN7SL37P-201ENST00000490461 307 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AC092349.1-201ENST00000504903 310 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AC108471.1-201ENST00000513977 287 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 SNORA81.2-201ENST00000516868 170 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 Y_RNA.720-201ENST00000517166 92 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AP002812.4-201ENST00000532139 286 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 CHEK2P2-201ENST00000554701 672 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 MIR378H-201ENST00000579966 83 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AC006116.6-201ENST00000593258 1103 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AL589765.5-201ENST00000596133 515 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 PRELID3BP8-201ENST00000604148 295 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 BNIP3P4-201ENST00000604946 565 ntBASIC7.03□□□□□ -1.28
CUEDC1Q9NWM3 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms