Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC006116.3-201ENST00000592968 361 ntBASIC5.63□□□□□ -1.51
BLOC1S4Q9NUP1 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.63□□□□□ -1.51
BLOC1S4Q9NUP1 BX005214.3-202ENST00000619809 325 ntBASIC5.63□□□□□ -1.51
BLOC1S4Q9NUP1 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.63□□□□□ -1.51
BLOC1S4Q9NUP1 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.63□□□□□ -1.51
BLOC1S4Q9NUP1 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.63□□□□□ -1.51
BLOC1S4Q9NUP1 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.63□□□□□ -1.51
BLOC1S4Q9NUP1 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.63□□□□□ -1.51
BLOC1S4Q9NUP1 AC009229.4-201ENST00000623854 1947 ntBASIC5.63□□□□□ -1.51
BLOC1S4Q9NUP1 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
BLOC1S4Q9NUP1 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BLOC1S4Q9NUP1 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.63□□□□□ -1.51
BLOC1S4Q9NUP1 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
BLOC1S4Q9NUP1 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 C4BPAP1-201ENST00000415474 1893 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 LRRC37BP1-201ENST00000398851 714 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AC099336.2-201ENST00000422457 254 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AL035458.1-201ENST00000433096 585 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 CYCSP24-201ENST00000445119 316 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AL591623.2-201ENST00000449978 222 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AC099560.2-201ENST00000457554 255 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 RNU6-1218P-201ENST00000458990 108 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 RPL23AP12-201ENST00000467573 473 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 RN7SL629P-201ENST00000489622 285 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 RPL23AP73-201ENST00000492507 471 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AC008628.1-201ENST00000508663 265 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 RNA5SP43-201ENST00000516559 110 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 IGKV2D-10-201ENST00000520194 281 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AC022832.1-201ENST00000530718 645 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 MIR4691-201ENST00000583764 85 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AC123786.2-201ENST00000603459 275 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AC096553.1-201ENST00000605169 829 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AP001033.2-201ENST00000609701 1003 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AC011447.7-201ENST00000624228 1590 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 AC090017.1-201ENST00000548612 1779 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 PHKBP1-201ENST00000450951 1951 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 THAP12P4-201ENST00000528321 2266 ntBASIC5.62□□□□□ -1.51
BLOC1S4Q9NUP1 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 DPPA2P3-201ENST00000411853 655 ntBASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 AL121882.1-201ENST00000422893 417 ntBASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 AL163193.1-201ENST00000444895 788 ntBASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 AC004980.3-201ENST00000447046 365 ntBASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 AL354714.3-201ENST00000447284 493 ntBASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 AC108729.2-201ENST00000476543 840 ntBASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 RN7SL177P-201ENST00000476596 299 ntBASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 RNA5SP228-201ENST00000516232 133 ntBASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 SNORA26.10-201ENST00000516427 141 ntBASIC5.61□□□□□ -1.51
BLOC1S4Q9NUP1 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms