Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AL627308.1-201ENST00000435693 821 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 SUMO2P1-206ENST00000445436 284 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 RN7SL515P-201ENST00000463999 297 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AC004453.1-201ENST00000487895 408 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 RPS4XP18-201ENST00000495480 763 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 RN7SL591P-201ENST00000496150 292 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 RNU6-760P-201ENST00000516078 97 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 RNU1-6P-201ENST00000516290 144 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AC005000.1-201ENST00000536192 288 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AC040174.2-201ENST00000602701 465 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AC073111.2-201ENST00000605657 1075 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 COX6CP4-201ENST00000605798 228 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AC024933.1-201ENST00000608472 348 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AP000894.4-201ENST00000610185 483 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AL512506.1-201ENST00000613918 449 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 BNIP3P41-202ENST00000616656 861 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AC068870.2-201ENST00000620635 389 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 MIR6719-201ENST00000622428 87 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AC005086.4-201ENST00000623065 213 ntBASIC5.07□□□□□ -1.6
SIX2Q9NPC8 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SIX2Q9NPC8 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 MRRFP1-201ENST00000435941 1675 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 AC012519.1-201ENST00000424588 610 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 SEC63P1-201ENST00000425785 1258 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 AL691517.1-201ENST00000440833 1235 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 CEACAMP7-201ENST00000444105 496 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 AL353718.1-201ENST00000451028 517 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 RBMY2TP-201ENST00000451162 947 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 AC110749.1-201ENST00000462007 357 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 RPL7P16-201ENST00000479738 738 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 RPS4XP14-201ENST00000493072 781 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 AC147055.3-201ENST00000510547 851 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 KCTD9P6-201ENST00000522306 950 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 OR4R2P-201ENST00000530815 597 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 BGLT3-201ENST00000564523 994 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 AC107993.1-201ENST00000591343 684 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 AC011487.3-201ENST00000593607 453 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 AC073137.1-201ENST00000605636 634 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 AL158211.2-201ENST00000607282 395 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 SDR42E1P1-201ENST00000611327 477 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 AC234782.5-201ENST00000617723 324 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 AC119674.1-220ENST00000641502 1048 ntBASIC5.06□□□□□ -1.6
SIX2Q9NPC8 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SIX2Q9NPC8 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.05□□□□□ -1.6
SIX2Q9NPC8 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms