Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 OSTCP2-201ENST00000437956 444 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 RN7SL263P-201ENST00000467969 290 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AC013828.1-201ENST00000481845 158 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 SETP14-201ENST00000497538 873 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 RFPL4AP3-201ENST00000515267 345 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 MTCO1P35-201ENST00000515270 228 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 RNY4P37-201ENST00000516225 96 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 IGHV3-63-201ENST00000518422 341 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 COX6B1P4-201ENST00000519826 484 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AP005119.2-201ENST00000579735 1105 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 KPNA2P3-201ENST00000584190 848 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 MIR5682-201ENST00000584864 76 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AC090578.1-201ENST00000604955 591 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AC064836.2-201ENST00000609491 462 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AC027807.2-201ENST00000616099 408 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 MRPL57P3-201ENST00000619218 176 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 AC069234.4-201ENST00000621276 412 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 FER-210ENST00000628534 558 ntTSL 5 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSU72Q9NP77 GUCY1B2-204ENST00000531898 1979 ntBASIC6.36□□□□□ -1.39
SSU72Q9NP77 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSU72Q9NP77 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSU72Q9NP77 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.36□□□□□ -1.39
SSU72Q9NP77 ZNF733P-202ENST00000444809 1573 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSU72Q9NP77 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSU72Q9NP77 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSU72Q9NP77 GTF2H2B-203ENST00000508065 1432 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSU72Q9NP77 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSU72Q9NP77 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSU72Q9NP77 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSU72Q9NP77 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSU72Q9NP77 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSU72Q9NP77 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSU72Q9NP77 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSU72Q9NP77 Y_RNA.535-201ENST00000384612 99 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 SNORA40.3-201ENST00000390964 122 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 RNU6-876P-201ENST00000391295 104 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 NHP2P2-201ENST00000396362 460 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 FCF1P10-201ENST00000407590 479 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 RNU2-65P-201ENST00000410162 185 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 AIMP1P1-201ENST00000418670 937 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC093698.1-201ENST00000423843 571 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC092651.1-201ENST00000426110 312 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 MTND4LP10-201ENST00000435146 291 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 RPL14P5-201ENST00000436474 730 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 AL450263.2-201ENST00000439400 589 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC027124.1-201ENST00000440852 466 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 UBBP5-201ENST00000446970 266 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 AL606490.1-201ENST00000452266 765 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 RPS7P10-201ENST00000464254 603 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 LARP1BP2-201ENST00000486594 519 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 AHI1-208ENST00000488690 712 ntTSL 5 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 RPL7P24-201ENST00000493052 752 ntBASIC6.35□□□□□ -1.39
SSU72Q9NP77 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
SSU72Q9NP77 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms