Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC005522.1-201ENST00000395416 346 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 AL353692.2-201ENST00000407054 335 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 BX510359.3-201ENST00000422168 306 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 UBE2D3P3-201ENST00000426992 425 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 RPS26P4-201ENST00000431743 355 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 MRPL50P1-201ENST00000431951 384 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 SNRPFP2-201ENST00000440710 251 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 TXNP5-201ENST00000441043 315 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 AL163193.1-201ENST00000444895 788 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 RAB28P3-201ENST00000448325 597 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 HMGN1P5-201ENST00000448591 263 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 GYG1P1-201ENST00000460864 698 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 RPL5P22-201ENST00000480199 884 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 MTCO2P9-201ENST00000503214 694 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 AL671862.1-201ENST00000515851 349 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 AC068339.2-201ENST00000534395 618 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 AL049830.4-201ENST00000555149 351 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 AC005242.1-201ENST00000585658 438 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 AC097460.3-201ENST00000623099 442 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 AC010872.1-201ENST00000624225 675 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 OR5AC4P-202ENST00000642086 985 ntBASIC5.2□□□□□ -1.58
PCDH9Q9HC56 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 SMG1P4-204ENST00000523028 4131 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 AC097461.1-201ENST00000568928 2821 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 RPL23P2-201ENST00000320371 421 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 VN1R37P-201ENST00000419096 748 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 AC005033.1-201ENST00000428904 813 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 RPS29P9-201ENST00000440360 171 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 AC002553.2-201ENST00000453217 340 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 MTND2P6-201ENST00000455337 1030 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 RPS17P2-201ENST00000461663 408 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 ATP5G1P3-201ENST00000463301 410 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 AC074386.1-201ENST00000476560 767 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 RN7SL177P-201ENST00000476596 299 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 AC006499.3-201ENST00000506077 748 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 RNA5SP303-201ENST00000516192 130 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 EIF4A2P5-201ENST00000529914 499 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 AC022832.1-201ENST00000530718 645 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 AL390334.1-201ENST00000556395 450 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 AL133370.2-201ENST00000619934 439 ntBASIC5.19□□□□□ -1.58
PCDH9Q9HC56 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PCDH9Q9HC56 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms