Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 RNA5SP105-201ENST00000391123 113 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 RPL12P17-201ENST00000432393 498 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 CETN4P-201ENST00000432407 469 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 GAPDHP58-201ENST00000438477 1006 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 RPS27P5-201ENST00000444247 244 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 RPL6P5-201ENST00000445678 828 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 MTATP6P26-201ENST00000445926 662 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 RPL7P61-201ENST00000451721 751 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 CBX1P2-201ENST00000453841 458 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 SNORD11.1-201ENST00000459482 85 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 RN7SL515P-201ENST00000463999 297 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 METTL15P1-201ENST00000481421 1045 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AC016559.2-201ENST00000510759 359 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 MTND6P2-201ENST00000512226 524 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AC112673.1-201ENST00000513168 575 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AC068993.1-201ENST00000546724 589 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 MTND3P12-201ENST00000559068 328 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AC010735.1-201ENST00000567305 1026 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 RNU4-5P-201ENST00000607255 135 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AC093673.2-201ENST00000609674 331 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AC245100.7-201ENST00000609678 442 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 MIR7155-201ENST00000615925 56 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AP000676.4-201ENST00000624659 623 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AC019226.2-201ENST00000625973 424 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 THAP12P5-201ENST00000405864 2275 ntBASIC5.54□□□□□ -1.52
USP29Q9HBJ7 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USP29Q9HBJ7 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 AC073136.1-201ENST00000449426 2884 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 OR1L6-202ENST00000373684 1044 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 SNORA48.4-201ENST00000391089 134 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 RNU2-17P-201ENST00000410290 190 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 MTATP6P20-201ENST00000414147 562 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 XKRYP4-201ENST00000414395 483 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 AC234781.4-201ENST00000419384 244 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 XKRYP1-201ENST00000423438 492 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 SRSF1P1-201ENST00000424058 520 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 MGAT2P2-201ENST00000427194 797 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 AC092634.2-201ENST00000428146 1010 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 XKRYP2-201ENST00000432915 492 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 RPL19P16-201ENST00000433839 588 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 XKRYP5-201ENST00000449659 483 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 RN7SL172P-201ENST00000460535 303 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 AC092754.1-201ENST00000472975 479 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 RN7SL727P-201ENST00000482164 296 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 RPL32P9-201ENST00000487963 407 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 RPS23P1-201ENST00000491662 432 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 AC024558.1-201ENST00000505008 528 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms