Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC010627.1-201ENST00000503819 1294 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC117522.2-201ENST00000510049 657 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 RN7SKP287-201ENST00000516546 266 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC012400.1-201ENST00000518452 381 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC074029.2-201ENST00000551045 634 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC233266.2-201ENST00000567067 528 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC016839.1-201ENST00000578162 867 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC104785.1-201ENST00000603220 588 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC093424.1-201ENST00000604999 338 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 KATNBL1P5-201ENST00000605015 517 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AL121652.1-201ENST00000608851 448 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AL139124.1-201ENST00000609123 421 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC005156.1-201ENST00000613371 573 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 CASC19-221ENST00000641309 1382 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC020633.1-201ENST00000468439 2247 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 THAP12P4-201ENST00000528321 2266 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 AL034549.2-201ENST00000618285 3373 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 U3.3-201ENST00000362986 216 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 SNORD51.1-201ENST00000365405 77 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 SNORA56-201ENST00000383966 129 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 GJA6P-201ENST00000415117 1042 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 EI24P4-201ENST00000423683 1078 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 USP9YP28-201ENST00000435142 589 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 H2AFZP6-201ENST00000444403 394 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 AC108161.1-201ENST00000461060 402 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 AC097484.1-201ENST00000471148 389 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 AC069304.1-201ENST00000491593 704 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 AC021193.1-201ENST00000511607 420 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 AC020937.1-201ENST00000519677 1013 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 MTCO1P47-201ENST00000523889 1271 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 AC008751.2-201ENST00000597885 980 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 AC009237.13-201ENST00000603193 276 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 AL355802.4-201ENST00000607635 548 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 AC090116.1-201ENST00000615679 446 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 AC091905.4-201ENST00000623432 202 ntBASIC5.41□□□□□ -1.54
EBF3Q9H4W6 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
EBF3Q9H4W6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms