Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 AC012065.4-201ENST00000602445 679 ntBASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 AL157899.1-201ENST00000604110 936 ntBASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 AL683813.2-201ENST00000605245 502 ntBASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 MIR6811-201ENST00000620409 58 ntBASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 MRPL57P1-201ENST00000621486 265 ntBASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 LINC02495-203ENST00000636704 242 ntBASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 AC062029.1-202ENST00000606164 3651 ntBASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 VN2R3P-201ENST00000422626 1412 ntBASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 AC092111.2-201ENST00000611627 1414 ntBASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SSBP3Q9BWW4 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 SNORA63-201ENST00000363450 132 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 Y_RNA.162-201ENST00000363683 102 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 RNA5SP232-201ENST00000364144 119 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 RN7SKP171-201ENST00000364417 303 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 Y_RNA.311-201ENST00000365068 96 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 RNA5SP77-201ENST00000365394 120 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 RN7SKP86-201ENST00000410454 332 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 EEF1A1P40-201ENST00000412883 573 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC019050.1-201ENST00000418508 492 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 KCTD9P3-201ENST00000434597 1169 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC242426.1-201ENST00000435270 960 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 ARPC3P1-201ENST00000437218 533 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC073614.1-201ENST00000438690 650 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC023512.1-201ENST00000444513 499 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC010240.2-201ENST00000445363 1205 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AL157827.1-201ENST00000447622 132 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC118758.1-202ENST00000454719 225 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 RPL5P24-201ENST00000463742 885 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 RN7SL168P-201ENST00000463821 279 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 VPS26AP1-201ENST00000483197 979 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC107398.1-201ENST00000486904 505 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 NENFP3-201ENST00000503735 313 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 RNA5SP418-201ENST00000515951 117 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 RNU6-1153P-201ENST00000516760 105 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AL133399.1-201ENST00000527476 298 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AL391840.1-201ENST00000571144 367 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 VN1R79P-201ENST00000593540 513 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC103792.1-201ENST00000603591 919 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AL359704.2-201ENST00000604335 521 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC012557.1-201ENST00000607115 611 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 MIR7109-201ENST00000613748 65 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC091834.1-201ENST00000614543 472 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms