Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AC034244.2-201ENST00000514668 858 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 OSBPL9P3-201ENST00000534523 595 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 MIR3176-201ENST00000582210 90 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AP003117.1-201ENST00000602771 554 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 SUGT1P3-202ENST00000604259 383 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AP000864.1-201ENST00000609424 650 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 MIR1264-201ENST00000616374 69 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 MIR6826-201ENST00000617808 98 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AL158062.1-201ENST00000619632 745 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AL138955.1-201ENST00000622881 1040 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AC015660.5-201ENST00000623238 564 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 CYP4F35P-202ENST00000636121 390 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.09□□□□□ -1.6
SLC44A1Q8WWI5 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SLC44A1Q8WWI5 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SLC44A1Q8WWI5 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SLC44A1Q8WWI5 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AL138820.1-201ENST00000617901 5305 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 RN7SKP113-201ENST00000363891 295 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AL355143.1-201ENST00000407101 841 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 Z68694.1-201ENST00000413929 841 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AL133325.1-201ENST00000421090 382 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AL354692.1-201ENST00000423044 315 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AC093655.2-201ENST00000425735 631 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 CYCSP12-201ENST00000437729 300 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AL450023.3-201ENST00000440592 271 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 Z92846.1-201ENST00000456203 268 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 RPS17P2-201ENST00000461663 408 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 RN7SL443P-201ENST00000464331 290 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 RPS4XP20-201ENST00000505751 772 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AC007225.2-201ENST00000562529 256 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AL390726.5-202ENST00000564800 256 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 MIR8069-1-201ENST00000616627 86 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 MIR8069-2-201ENST00000621412 86 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 OR5AC4P-202ENST00000642086 985 ntBASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A1Q8WWI5 HSPA8P19-201ENST00000505359 1517 ntBASIC5.07□□□□□ -1.6
SLC44A1Q8WWI5 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A1Q8WWI5 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SLC44A1Q8WWI5 MTCO1P4-201ENST00000520516 1409 ntBASIC5.07□□□□□ -1.6
SLC44A1Q8WWI5 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC44A1Q8WWI5 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SLC44A1Q8WWI5 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A1Q8WWI5 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.07□□□□□ -1.6
SLC44A1Q8WWI5 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A1Q8WWI5 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms