Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL121657.1-201ENST00000327215 531 ntBASIC5.7□□□□□ -1.5
SNED1Q8TER0 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 ACTR3P2-201ENST00000439585 1257 ntBASIC5.7□□□□□ -1.5
SNED1Q8TER0 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 AC245028.2-201ENST00000458673 253 ntBASIC5.7□□□□□ -1.5
SNED1Q8TER0 SCARNA10-201ENST00000459255 330 ntBASIC5.7□□□□□ -1.5
SNED1Q8TER0 AC025164.1-201ENST00000496249 478 ntBASIC5.7□□□□□ -1.5
SNED1Q8TER0 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.7□□□□□ -1.5
SNED1Q8TER0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNED1Q8TER0 AC010476.1-201ENST00000519111 851 ntBASIC5.7□□□□□ -1.5
SNED1Q8TER0 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 GLRXP2-201ENST00000555594 321 ntBASIC5.7□□□□□ -1.5
SNED1Q8TER0 AC011477.5-201ENST00000586571 259 ntBASIC5.7□□□□□ -1.5
SNED1Q8TER0 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.7□□□□□ -1.5
SNED1Q8TER0 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 AC006453.5-201ENST00000636451 619 ntBASIC5.7□□□□□ -1.5
SNED1Q8TER0 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNED1Q8TER0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNED1Q8TER0 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNED1Q8TER0 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNED1Q8TER0 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNED1Q8TER0 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNED1Q8TER0 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SNED1Q8TER0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SNED1Q8TER0 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNED1Q8TER0 VN2R3P-201ENST00000422626 1412 ntBASIC5.69□□□□□ -1.5
SNED1Q8TER0 AC135352.1-201ENST00000506173 1418 ntBASIC5.69□□□□□ -1.5
SNED1Q8TER0 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SNED1Q8TER0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.69□□□□□ -1.5
SNED1Q8TER0 AC017078.1-201ENST00000416146 368 ntBASIC5.69□□□□□ -1.5
SNED1Q8TER0 RPL36AP36-201ENST00000418616 301 ntBASIC5.69□□□□□ -1.5
SNED1Q8TER0 TRGV7-201ENST00000427089 353 ntBASIC5.69□□□□□ -1.5
SNED1Q8TER0 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.69□□□□□ -1.5
SNED1Q8TER0 H2AFZP5-201ENST00000446960 382 ntBASIC5.69□□□□□ -1.5
SNED1Q8TER0 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.69□□□□□ -1.5
SNED1Q8TER0 RN7SL98P-201ENST00000462271 300 ntBASIC5.69□□□□□ -1.5
SNED1Q8TER0 RPS27AP16-201ENST00000492222 470 ntBASIC5.69□□□□□ -1.5
SNED1Q8TER0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SNED1Q8TER0 IGLVIV-65-201ENST00000517313 360 ntBASIC5.69□□□□□ -1.5
SNED1Q8TER0 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SNED1Q8TER0 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNED1Q8TER0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.69□□□□□ -1.5
SNED1Q8TER0 FRG1EP-201ENST00000634469 770 ntBASIC5.69□□□□□ -1.5
SNED1Q8TER0 AL450345.1-202ENST00000605741 3881 ntBASIC5.69□□□□□ -1.5
SNED1Q8TER0 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.69□□□□□ -1.5
SNED1Q8TER0 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SNED1Q8TER0 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SNED1Q8TER0 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNED1Q8TER0 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
SNED1Q8TER0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SNED1Q8TER0 AC120036.2-201ENST00000509729 1474 ntBASIC5.68□□□□□ -1.5
SNED1Q8TER0 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNED1Q8TER0 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNED1Q8TER0 RNU1-130P-201ENST00000363930 160 ntBASIC5.68□□□□□ -1.5
SNED1Q8TER0 SNORA5.1-201ENST00000384275 131 ntBASIC5.68□□□□□ -1.5
SNED1Q8TER0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.68□□□□□ -1.5
SNED1Q8TER0 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.68□□□□□ -1.5
SNED1Q8TER0 RPS3AP54-201ENST00000435535 734 ntBASIC5.68□□□□□ -1.5
SNED1Q8TER0 MRPL35P2-201ENST00000448009 511 ntBASIC5.68□□□□□ -1.5
SNED1Q8TER0 RN7SL604P-201ENST00000492589 296 ntBASIC5.68□□□□□ -1.5
SNED1Q8TER0 AL049874.2-201ENST00000492636 288 ntBASIC5.68□□□□□ -1.5
SNED1Q8TER0 RN7SL810P-201ENST00000493031 276 ntBASIC5.68□□□□□ -1.5
SNED1Q8TER0 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.68□□□□□ -1.5
SNED1Q8TER0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.68□□□□□ -1.5
SNED1Q8TER0 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.68□□□□□ -1.5
SNED1Q8TER0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.68□□□□□ -1.5
SNED1Q8TER0 AC034105.4-201ENST00000568304 277 ntBASIC5.68□□□□□ -1.5
SNED1Q8TER0 AP001160.4-201ENST00000596971 382 ntBASIC5.68□□□□□ -1.5
SNED1Q8TER0 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.68□□□□□ -1.5
SNED1Q8TER0 Z95327.3-201ENST00000610385 572 ntBASIC5.68□□□□□ -1.5
SNED1Q8TER0 SNX18P1Y-201ENST00000616231 511 ntBASIC5.68□□□□□ -1.5
SNED1Q8TER0 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNED1Q8TER0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SNED1Q8TER0 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNED1Q8TER0 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNED1Q8TER0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.68□□□□□ -1.5
SNED1Q8TER0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNED1Q8TER0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.67□□□□□ -1.5
SNED1Q8TER0 AL122126.1-201ENST00000546905 1318 ntBASIC5.67□□□□□ -1.5
SNED1Q8TER0 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNED1Q8TER0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNED1Q8TER0 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SNED1Q8TER0 SNORA71.2-201ENST00000364941 134 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms