Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 GTF3AP5-201ENST00000442645 697 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 OR6C72P-201ENST00000451403 892 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 AC092647.2-201ENST00000452998 253 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 RPL7AP52-201ENST00000458096 790 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 CREM-220ENST00000463314 964 ntTSL 2 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 LARP7P4-201ENST00000481075 878 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 AC058823.1-201ENST00000485315 474 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 IGBP1P4-201ENST00000503202 879 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 HMGN1P9-201ENST00000515212 298 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 HMGB1P19-201ENST00000517578 577 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 AC012400.1-201ENST00000518452 381 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 BNIP3P1-201ENST00000547295 580 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 OR11H3P-201ENST00000554547 982 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 MIR3934-201ENST00000579806 107 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 AL137246.1-201ENST00000607072 977 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 MIR6820-201ENST00000611508 62 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 MIR6798-201ENST00000612887 67 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 AC135068.5-201ENST00000624197 983 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 BMS1P21-201ENST00000634565 365 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 AC083843.3-201ENST00000623679 2186 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SCXQ7RTU7 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SCXQ7RTU7 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
SCXQ7RTU7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SCXQ7RTU7 PANDAR-201ENST00000629595 1506 ntBASIC3.33□□□□□ -1.88
SCXQ7RTU7 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC3.33□□□□□ -1.88
SCXQ7RTU7 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SCXQ7RTU7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCXQ7RTU7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCXQ7RTU7 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SCXQ7RTU7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCXQ7RTU7 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCXQ7RTU7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCXQ7RTU7 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 MT-TP-201ENST00000387461 68 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 PPIAP9-201ENST00000403866 498 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SCXQ7RTU7 RNU6-603P-201ENST00000411403 107 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 COX5BP7-201ENST00000414780 274 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 PCNPP4-201ENST00000414817 517 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 RBMY2KP-201ENST00000418221 992 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 SEC63P1-201ENST00000425785 1258 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 RPL7AP49-201ENST00000429522 581 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 AL591438.1-201ENST00000433508 581 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 MTCO3P17-201ENST00000443775 513 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 Z80107.2-201ENST00000445127 392 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC079168.1-201ENST00000458741 345 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 RPS3AP41-201ENST00000462701 778 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC022336.1-201ENST00000475510 337 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 METTL15P1-201ENST00000481421 1045 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 RN7SL346P-201ENST00000491561 294 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC113430.1-201ENST00000506872 718 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC021106.1-201ENST00000509020 1058 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 RN7SKP260-201ENST00000516907 149 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 MTCYBP19-201ENST00000517463 1124 ntBASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC3.32□□□□□ -1.88
SCXQ7RTU7 CLMN-206ENST00000556441 452 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms