Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 AC100757.1-201ENST00000616872 1835 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC38Q502W7 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC38Q502W7 RNU6-543P-201ENST00000362576 108 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 RNU6-304P-201ENST00000364855 107 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 RNU6-317P-201ENST00000384031 107 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 RNA5SP241-201ENST00000391326 114 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 AL035419.1-201ENST00000397037 564 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 AC007161.1-204ENST00000423039 460 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 AL354710.1-201ENST00000453641 246 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 AC008280.2-201ENST00000455473 307 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 AC087672.1-201ENST00000479876 766 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 METTL15P1-201ENST00000481421 1045 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 AC010627.1-201ENST00000503819 1294 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 TPT1P8-201ENST00000510120 555 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 AL096712.1-201ENST00000614561 159 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 AC099654.9-201ENST00000637055 678 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 U6.107-201ENST00000637108 79 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 AC009313.2-201ENST00000417893 1941 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC38Q502W7 TRIM51GP-201ENST00000534741 1350 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 AC106872.5-201ENST00000508856 1416 ntBASIC5.63□□□□□ -1.51
CCDC38Q502W7 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC38Q502W7 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CCDC38Q502W7 BX005019.1-201ENST00000561881 1810 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC38Q502W7 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC38Q502W7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC38Q502W7 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 MUC2-202ENST00000613187 4845 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC38Q502W7 ENSAP3-201ENST00000312710 333 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 RN7SKP15-201ENST00000364742 309 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 RN7SKP269-201ENST00000365545 319 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC38Q502W7 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC38Q502W7 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 U6.112-201ENST00000384129 70 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 RNU6-932P-201ENST00000391108 106 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 AL590290.1-201ENST00000405336 380 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 RNA5SP487-201ENST00000410186 122 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 VN1R51P-201ENST00000411675 945 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 HMGN1P20-201ENST00000411849 300 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 RPS3P2-201ENST00000421346 701 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 NPM1P22-201ENST00000427761 952 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC000041.1-201ENST00000439655 175 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 AL935212.3-201ENST00000450729 284 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC005229.2-201ENST00000456995 399 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 SUMO2P5-201ENST00000506790 245 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC38Q502W7 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 IGLVIV-64-201ENST00000518581 301 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC010376.1-201ENST00000522101 334 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC083923.1-201ENST00000523708 376 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC090022.1-201ENST00000546569 311 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 AL121594.4-201ENST00000556211 1196 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC245884.10-201ENST00000597355 337 ntBASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC38Q502W7 AC023762.1-201ENST00000603280 584 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms