Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
TRIM71Q2Q1W2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
TRIM71Q2Q1W2 AC012618.3-205ENST00000637896 1496 ntBASIC5.81□□□□□ -1.48
TRIM71Q2Q1W2 AC020656.2-201ENST00000613291 5309 ntBASIC5.81□□□□□ -1.48
TRIM71Q2Q1W2 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM71Q2Q1W2 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TRIM71Q2Q1W2 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM71Q2Q1W2 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM71Q2Q1W2 MTND5P11-201ENST00000511037 1812 ntBASIC5.81□□□□□ -1.48
TRIM71Q2Q1W2 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AC007342.7-201ENST00000624610 2337 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 MIR600-201ENST00000385007 98 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 RNU6-796P-201ENST00000391086 107 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 MIR1182-201ENST00000408363 97 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 XKRYP4-201ENST00000414395 483 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 HMGN2P27-201ENST00000427352 270 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 MTCO1P43-201ENST00000431831 488 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AC006994.1-201ENST00000438212 839 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 RPS27P5-201ENST00000444247 244 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AL096829.2-201ENST00000446582 742 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 XKRYP5-201ENST00000449659 483 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 RPS29P33-201ENST00000456717 146 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AC021205.1-201ENST00000468797 348 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AC068587.2-201ENST00000478386 781 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 GTF2IP9-201ENST00000502460 301 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 CIR1P1-201ENST00000524055 1133 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AC087894.1-201ENST00000538359 518 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AC008033.2-201ENST00000542626 177 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AC137768.1-201ENST00000549998 553 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 MTND1P24-201ENST00000552175 861 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AC009852.2-201ENST00000567898 485 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 MIR4691-201ENST00000583764 85 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 EIF1P5-201ENST00000585002 234 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 ELOCP28-201ENST00000590044 317 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AC005252.1-201ENST00000604518 1063 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AC091905.4-201ENST00000623432 202 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AC009039.2-201ENST00000624524 529 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 AC013437.2-201ENST00000639587 677 ntBASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
TRIM71Q2Q1W2 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 AL031595.2-201ENST00000624215 19071 ntBASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 RNU6-252P-201ENST00000363232 107 ntBASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 RNU4-7P-201ENST00000364758 141 ntBASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 ATP5HP3-201ENST00000396994 486 ntBASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 HSPA8P15-201ENST00000401676 786 ntBASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 ATF1P1-201ENST00000406040 927 ntBASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 OR2AM1P-201ENST00000422137 422 ntBASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 AC092447.3-201ENST00000426027 686 ntBASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 TPTE2P3-201ENST00000441562 1189 ntBASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 snoU13.20-201ENST00000459180 104 ntBASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 CYCSP20-201ENST00000473154 315 ntBASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 CDH12P2-201ENST00000504393 298 ntBASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 AC091912.1-201ENST00000511351 248 ntBASIC5.79□□□□□ -1.48
TRIM71Q2Q1W2 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms