Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL16A1Q07092 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
COL16A1Q07092 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL16A1Q07092 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COL16A1Q07092 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.18□□□□□ -1.42
COL16A1Q07092 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.18□□□□□ -1.42
COL16A1Q07092 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL16A1Q07092 AL451142.1-201ENST00000375867 775 ntBASIC6.18□□□□□ -1.42
COL16A1Q07092 AL451139.1-201ENST00000434718 346 ntBASIC6.18□□□□□ -1.42
COL16A1Q07092 AL356276.2-201ENST00000435919 558 ntBASIC6.18□□□□□ -1.42
COL16A1Q07092 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
COL16A1Q07092 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC6.18□□□□□ -1.42
COL16A1Q07092 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.18□□□□□ -1.42
COL16A1Q07092 AC005899.7-201ENST00000618199 588 ntBASIC6.18□□□□□ -1.42
COL16A1Q07092 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL16A1Q07092 AC104260.2-201ENST00000623551 3497 ntBASIC6.18□□□□□ -1.42
COL16A1Q07092 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC6.18□□□□□ -1.42
COL16A1Q07092 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL16A1Q07092 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL16A1Q07092 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.18□□□□□ -1.42
COL16A1Q07092 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
COL16A1Q07092 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL16A1Q07092 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COL16A1Q07092 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL16A1Q07092 SNORA70.9-201ENST00000384370 135 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.17□□□□□ -1.42
COL16A1Q07092 CYCSP43-201ENST00000438233 310 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 AL500522.2-201ENST00000448562 343 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.17□□□□□ -1.42
COL16A1Q07092 RNU4-89P-201ENST00000607443 133 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 AL352984.2-202ENST00000613699 155 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 AL357559.1-201ENST00000622228 274 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 AC009120.7-201ENST00000623452 780 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 AC018628.1-201ENST00000624147 3819 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL16A1Q07092 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL16A1Q07092 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL16A1Q07092 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
COL16A1Q07092 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL16A1Q07092 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL16A1Q07092 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL16A1Q07092 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.17□□□□□ -1.42
COL16A1Q07092 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL16A1Q07092 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL16A1Q07092 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
COL16A1Q07092 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL16A1Q07092 RNA5SP241-201ENST00000391326 114 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 RPL12P9-201ENST00000412942 488 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 AL139095.3-201ENST00000419672 1203 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 AL035246.1-201ENST00000433554 1255 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.17□□□□□ -1.42
COL16A1Q07092 AL157884.3-201ENST00000448273 1184 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 RPL5P32-201ENST00000454085 879 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 RPL7P49-201ENST00000471402 708 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL16A1Q07092 RN7SKP157-201ENST00000516174 282 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 AP001804.2-201ENST00000533932 910 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.17□□□□□ -1.42
COL16A1Q07092 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.17□□□□□ -1.42
COL16A1Q07092 AC112484.5-201ENST00000624189 228 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.17□□□□□ -1.42
COL16A1Q07092 AL121950.1-201ENST00000624993 2077 ntBASIC6.17□□□□□ -1.42
COL16A1Q07092 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
COL16A1Q07092 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
COL16A1Q07092 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
COL16A1Q07092 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL16A1Q07092 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.16□□□□□ -1.42
COL16A1Q07092 AL031119.1-201ENST00000404707 1879 ntBASIC6.16□□□□□ -1.42
COL16A1Q07092 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL16A1Q07092 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.16□□□□□ -1.42
COL16A1Q07092 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
COL16A1Q07092 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.16□□□□□ -1.42
COL16A1Q07092 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL16A1Q07092 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COL16A1Q07092 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL16A1Q07092 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COL16A1Q07092 MIR491-201ENST00000384877 84 ntBASIC6.16□□□□□ -1.42
COL16A1Q07092 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.16□□□□□ -1.42
COL16A1Q07092 Z98745.1-201ENST00000402553 494 ntBASIC6.16□□□□□ -1.42
COL16A1Q07092 NDUFB4P4-201ENST00000404822 243 ntBASIC6.16□□□□□ -1.42
COL16A1Q07092 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.16□□□□□ -1.42
COL16A1Q07092 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC6.16□□□□□ -1.42
COL16A1Q07092 snoU13.29-201ENST00000459370 104 ntBASIC6.16□□□□□ -1.42
COL16A1Q07092 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.16□□□□□ -1.42
COL16A1Q07092 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL16A1Q07092 AC119751.5-201ENST00000514077 770 ntBASIC6.16□□□□□ -1.42
COL16A1Q07092 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC6.16□□□□□ -1.42
COL16A1Q07092 AC107016.1-201ENST00000550463 337 ntBASIC6.16□□□□□ -1.42
COL16A1Q07092 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.16□□□□□ -1.42
COL16A1Q07092 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL16A1Q07092 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.16□□□□□ -1.42
COL16A1Q07092 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.16□□□□□ -1.42
COL16A1Q07092 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC6.16□□□□□ -1.42
COL16A1Q07092 SNORA51-201ENST00000606420 132 ntBASIC6.16□□□□□ -1.42
COL16A1Q07092 AC006065.6-201ENST00000625201 545 ntBASIC6.16□□□□□ -1.42
COL16A1Q07092 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL16A1Q07092 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.16□□□□□ -1.42
COL16A1Q07092 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL16A1Q07092 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.16□□□□□ -1.42
COL16A1Q07092 AC079777.1-201ENST00000623836 1953 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms