Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 MIR3936-201ENST00000584304 110 ntBASIC5.04□□□□□ -1.6
GTF2BQ00403 BNIP3P41-202ENST00000616656 861 ntBASIC5.04□□□□□ -1.6
GTF2BQ00403 AC022106.2-201ENST00000620114 757 ntBASIC5.04□□□□□ -1.6
GTF2BQ00403 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.04□□□□□ -1.6
GTF2BQ00403 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
GTF2BQ00403 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
GTF2BQ00403 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
GTF2BQ00403 CDY3P-201ENST00000454543 1618 ntBASIC5.04□□□□□ -1.6
GTF2BQ00403 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
GTF2BQ00403 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
GTF2BQ00403 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GTF2BQ00403 AC108467.2-201ENST00000617640 1597 ntBASIC5.04□□□□□ -1.6
GTF2BQ00403 AL031595.2-201ENST00000624215 19071 ntBASIC5.03□□□□□ -1.6
GTF2BQ00403 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GTF2BQ00403 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
GTF2BQ00403 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
GTF2BQ00403 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GTF2BQ00403 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
GTF2BQ00403 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
GTF2BQ00403 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
GTF2BQ00403 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
GTF2BQ00403 SNORA71.2-201ENST00000364941 134 ntBASIC5.03□□□□□ -1.6
GTF2BQ00403 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GTF2BQ00403 RPS16P5-201ENST00000406501 404 ntBASIC5.03□□□□□ -1.6
GTF2BQ00403 SNORA11B-201ENST00000408175 129 ntBASIC5.03□□□□□ -1.6
GTF2BQ00403 MIR1271-201ENST00000408537 86 ntBASIC5.03□□□□□ -1.6
GTF2BQ00403 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.03□□□□□ -1.6
GTF2BQ00403 HSPE1P16-201ENST00000426640 348 ntBASIC5.03□□□□□ -1.6
GTF2BQ00403 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.03□□□□□ -1.6
GTF2BQ00403 FTLP19-201ENST00000433300 394 ntBASIC5.03□□□□□ -1.6
GTF2BQ00403 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.03□□□□□ -1.6
GTF2BQ00403 AL138878.2-201ENST00000440581 1241 ntBASIC5.03□□□□□ -1.6
GTF2BQ00403 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.03□□□□□ -1.6
GTF2BQ00403 RN7SL354P-201ENST00000469282 294 ntBASIC5.03□□□□□ -1.6
GTF2BQ00403 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.03□□□□□ -1.6
GTF2BQ00403 AC023762.1-201ENST00000603280 584 ntBASIC5.03□□□□□ -1.6
GTF2BQ00403 AC073342.3-201ENST00000624211 193 ntBASIC5.03□□□□□ -1.6
GTF2BQ00403 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
GTF2BQ00403 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GTF2BQ00403 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
GTF2BQ00403 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
GTF2BQ00403 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GTF2BQ00403 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GTF2BQ00403 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GTF2BQ00403 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GTF2BQ00403 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.02□□□□□ -1.61
GTF2BQ00403 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GTF2BQ00403 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GTF2BQ00403 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
GTF2BQ00403 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GTF2BQ00403 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
GTF2BQ00403 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GTF2BQ00403 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GTF2BQ00403 RNA5SP505-201ENST00000364748 108 ntBASIC5.02□□□□□ -1.61
GTF2BQ00403 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
GTF2BQ00403 RNU6-398P-201ENST00000384143 109 ntBASIC5.02□□□□□ -1.61
GTF2BQ00403 MIR192-201ENST00000384915 110 ntBASIC5.02□□□□□ -1.61
GTF2BQ00403 AL359643.1-201ENST00000404109 423 ntBASIC5.02□□□□□ -1.61
GTF2BQ00403 AC016769.2-201ENST00000414815 475 ntBASIC5.02□□□□□ -1.61
GTF2BQ00403 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.02□□□□□ -1.61
GTF2BQ00403 RAD23BP1-201ENST00000421404 1227 ntBASIC5.02□□□□□ -1.61
GTF2BQ00403 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.02□□□□□ -1.61
GTF2BQ00403 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.02□□□□□ -1.61
GTF2BQ00403 RPL23AP37-201ENST00000479658 549 ntBASIC5.02□□□□□ -1.61
GTF2BQ00403 RPS26P24-201ENST00000497656 331 ntBASIC5.02□□□□□ -1.61
GTF2BQ00403 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.02□□□□□ -1.61
GTF2BQ00403 GOLGA5P1-201ENST00000507317 980 ntBASIC5.02□□□□□ -1.61
GTF2BQ00403 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GTF2BQ00403 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.02□□□□□ -1.61
GTF2BQ00403 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.02□□□□□ -1.61
GTF2BQ00403 RNA5SP446-201ENST00000515955 82 ntBASIC5.02□□□□□ -1.61
GTF2BQ00403 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.02□□□□□ -1.61
GTF2BQ00403 AP001781.1-201ENST00000530977 207 ntBASIC5.02□□□□□ -1.61
GTF2BQ00403 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.02□□□□□ -1.61
GTF2BQ00403 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.02□□□□□ -1.61
GTF2BQ00403 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.02□□□□□ -1.61
GTF2BQ00403 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.02□□□□□ -1.61
GTF2BQ00403 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.02□□□□□ -1.61
GTF2BQ00403 AL133406.3-201ENST00000606817 541 ntBASIC5.02□□□□□ -1.61
GTF2BQ00403 AC097505.1-201ENST00000610199 565 ntBASIC5.02□□□□□ -1.61
GTF2BQ00403 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.02□□□□□ -1.61
GTF2BQ00403 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
GTF2BQ00403 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
GTF2BQ00403 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.02□□□□□ -1.61
GTF2BQ00403 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
GTF2BQ00403 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GTF2BQ00403 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
GTF2BQ00403 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
GTF2BQ00403 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
GTF2BQ00403 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
GTF2BQ00403 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GTF2BQ00403 AC099654.3-201ENST00000447087 1546 ntBASIC5.02□□□□□ -1.61
GTF2BQ00403 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.02□□□□□ -1.61
GTF2BQ00403 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
GTF2BQ00403 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GTF2BQ00403 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
GTF2BQ00403 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GTF2BQ00403 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GTF2BQ00403 UGT2B26P-201ENST00000508672 1613 ntBASIC5.01□□□□□ -1.61
GTF2BQ00403 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms