Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC092079.1-201ENST00000558620 1985 ntBASIC4.22□□□□□ -1.73
ACTBP60709 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.22□□□□□ -1.73
ACTBP60709 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
ACTBP60709 AC108751.5-201ENST00000492880 1336 ntBASIC4.21□□□□□ -1.73
ACTBP60709 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.21□□□□□ -1.73
ACTBP60709 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
ACTBP60709 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
ACTBP60709 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.21□□□□□ -1.73
ACTBP60709 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
ACTBP60709 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
ACTBP60709 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.21□□□□□ -1.74
ACTBP60709 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
ACTBP60709 SNORA66-201ENST00000384792 133 ntBASIC4.21□□□□□ -1.74
ACTBP60709 RNA5SP372-201ENST00000390836 115 ntBASIC4.21□□□□□ -1.74
ACTBP60709 RNA5SP146-201ENST00000410743 123 ntBASIC4.21□□□□□ -1.74
ACTBP60709 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.21□□□□□ -1.74
ACTBP60709 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.21□□□□□ -1.74
ACTBP60709 E2F6P2-201ENST00000420708 748 ntBASIC4.21□□□□□ -1.74
ACTBP60709 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.21□□□□□ -1.74
ACTBP60709 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.21□□□□□ -1.74
ACTBP60709 PPIAP13-201ENST00000434706 478 ntBASIC4.21□□□□□ -1.74
ACTBP60709 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.21□□□□□ -1.74
ACTBP60709 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.21□□□□□ -1.74
ACTBP60709 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.21□□□□□ -1.74
ACTBP60709 RAB9AP5-201ENST00000437794 597 ntBASIC4.21□□□□□ -1.74
ACTBP60709 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ACTBP60709 RAB9AP2-201ENST00000443911 597 ntBASIC4.21□□□□□ -1.74
ACTBP60709 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.21□□□□□ -1.74
ACTBP60709 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.21□□□□□ -1.74
ACTBP60709 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.21□□□□□ -1.74
ACTBP60709 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.21□□□□□ -1.74
ACTBP60709 RPL5P16-201ENST00000471467 790 ntBASIC4.21□□□□□ -1.74
ACTBP60709 RN7SL41P-201ENST00000476144 297 ntBASIC4.21□□□□□ -1.74
ACTBP60709 RPL7P6-201ENST00000480903 738 ntBASIC4.21□□□□□ -1.74
ACTBP60709 RN7SL727P-201ENST00000482164 296 ntBASIC4.21□□□□□ -1.74
ACTBP60709 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.21□□□□□ -1.74
ACTBP60709 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.21□□□□□ -1.74
ACTBP60709 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.21□□□□□ -1.74
ACTBP60709 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.21□□□□□ -1.74
ACTBP60709 STMN1P2-201ENST00000508435 439 ntBASIC4.21□□□□□ -1.74
ACTBP60709 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.21□□□□□ -1.74
ACTBP60709 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
ACTBP60709 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.21□□□□□ -1.74
ACTBP60709 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.21□□□□□ -1.74
ACTBP60709 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.21□□□□□ -1.74
ACTBP60709 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ACTBP60709 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.21□□□□□ -1.74
ACTBP60709 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.21□□□□□ -1.74
ACTBP60709 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.21□□□□□ -1.74
ACTBP60709 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.21□□□□□ -1.74
ACTBP60709 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.21□□□□□ -1.74
ACTBP60709 AC069307.1-201ENST00000602820 447 ntBASIC4.21□□□□□ -1.74
ACTBP60709 RPSAP73-201ENST00000614820 330 ntBASIC4.21□□□□□ -1.74
ACTBP60709 MIR6729-201ENST00000618194 65 ntBASIC4.21□□□□□ -1.74
ACTBP60709 AC004232.3-201ENST00000622977 525 ntBASIC4.21□□□□□ -1.74
ACTBP60709 MIR6715B-201ENST00000637172 77 ntBASIC4.21□□□□□ -1.74
ACTBP60709 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ACTBP60709 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
ACTBP60709 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ACTBP60709 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
ACTBP60709 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
ACTBP60709 OR51C1P-202ENST00000641159 1444 ntBASIC4.21□□□□□ -1.74
ACTBP60709 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ACTBP60709 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ACTBP60709 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
ACTBP60709 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ACTBP60709 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
ACTBP60709 RN7SKP162-201ENST00000363605 345 ntBASIC4.2□□□□□ -1.74
ACTBP60709 SNORD96B-201ENST00000386148 79 ntBASIC4.2□□□□□ -1.74
ACTBP60709 MIR1182-201ENST00000408363 97 ntBASIC4.2□□□□□ -1.74
ACTBP60709 SNORA77-201ENST00000408716 125 ntBASIC4.2□□□□□ -1.74
ACTBP60709 RPL35AP24-201ENST00000413846 330 ntBASIC4.2□□□□□ -1.74
ACTBP60709 AC004448.2-201ENST00000422360 586 ntBASIC4.2□□□□□ -1.74
ACTBP60709 AC108075.1-201ENST00000424692 529 ntBASIC4.2□□□□□ -1.74
ACTBP60709 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ACTBP60709 AC004938.1-201ENST00000438468 308 ntBASIC4.2□□□□□ -1.74
ACTBP60709 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.2□□□□□ -1.74
ACTBP60709 OR52Y1P-201ENST00000452418 828 ntBASIC4.2□□□□□ -1.74
ACTBP60709 RPL23AP65-201ENST00000475608 468 ntBASIC4.2□□□□□ -1.74
ACTBP60709 RPS4XP18-201ENST00000495480 763 ntBASIC4.2□□□□□ -1.74
ACTBP60709 RPS4XP20-201ENST00000505751 772 ntBASIC4.2□□□□□ -1.74
ACTBP60709 ATP5LP3-201ENST00000514223 304 ntBASIC4.2□□□□□ -1.74
ACTBP60709 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ACTBP60709 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.2□□□□□ -1.74
ACTBP60709 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.2□□□□□ -1.74
ACTBP60709 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ACTBP60709 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.2□□□□□ -1.74
ACTBP60709 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
ACTBP60709 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
ACTBP60709 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
ACTBP60709 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ACTBP60709 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ACTBP60709 AC011270.1-201ENST00000558606 583 ntBASIC4.2□□□□□ -1.74
ACTBP60709 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.2□□□□□ -1.74
ACTBP60709 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.2□□□□□ -1.74
ACTBP60709 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.2□□□□□ -1.74
ACTBP60709 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.2□□□□□ -1.74
ACTBP60709 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.2□□□□□ -1.74
ACTBP60709 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.2□□□□□ -1.74
ACTBP60709 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms