Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 HAUS1P1-201ENST00000505275 832 ntBASIC4.43□□□□□ -1.7
CLDN18P56856 ENPP7P11-201ENST00000505915 627 ntBASIC4.43□□□□□ -1.7
CLDN18P56856 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN18P56856 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN18P56856 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN18P56856 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN18P56856 RNA5SP392-201ENST00000516905 112 ntBASIC4.43□□□□□ -1.7
CLDN18P56856 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN18P56856 MORF4L1P3-201ENST00000525966 950 ntBASIC4.43□□□□□ -1.7
CLDN18P56856 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN18P56856 MIR4737-201ENST00000583979 81 ntBASIC4.43□□□□□ -1.7
CLDN18P56856 AC010615.3-201ENST00000597319 394 ntBASIC4.43□□□□□ -1.7
CLDN18P56856 AC020910.3-201ENST00000603701 874 ntBASIC4.43□□□□□ -1.7
CLDN18P56856 AL049794.2-201ENST00000616301 365 ntBASIC4.43□□□□□ -1.7
CLDN18P56856 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN18P56856 AC019206.1-201ENST00000621938 425 ntBASIC4.43□□□□□ -1.7
CLDN18P56856 FRG1EP-201ENST00000634469 770 ntBASIC4.43□□□□□ -1.7
CLDN18P56856 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN18P56856 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN18P56856 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
CLDN18P56856 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN18P56856 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
CLDN18P56856 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN18P56856 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN18P56856 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN18P56856 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN18P56856 AC107027.3-201ENST00000565095 3473 ntBASIC4.42□□□□□ -1.7
CLDN18P56856 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN18P56856 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CLDN18P56856 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.42□□□□□ -1.7
CLDN18P56856 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN18P56856 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN18P56856 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN18P56856 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN18P56856 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN18P56856 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN18P56856 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN18P56856 SNORA73.1-201ENST00000363107 205 ntBASIC4.42□□□□□ -1.7
CLDN18P56856 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CLDN18P56856 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN18P56856 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN18P56856 AC012512.1-201ENST00000446594 718 ntBASIC4.42□□□□□ -1.7
CLDN18P56856 SLC25A18P1-201ENST00000449385 454 ntBASIC4.42□□□□□ -1.7
CLDN18P56856 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN18P56856 RPL23AP56-201ENST00000460778 453 ntBASIC4.42□□□□□ -1.7
CLDN18P56856 AC063943.1-201ENST00000465434 453 ntBASIC4.42□□□□□ -1.7
CLDN18P56856 AC116562.1-201ENST00000485355 781 ntBASIC4.42□□□□□ -1.7
CLDN18P56856 IGLV2-34-201ENST00000490007 283 ntBASIC4.42□□□□□ -1.7
CLDN18P56856 RPS23P1-201ENST00000491662 432 ntBASIC4.42□□□□□ -1.7
CLDN18P56856 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.42□□□□□ -1.7
CLDN18P56856 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN18P56856 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN18P56856 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.42□□□□□ -1.7
CLDN18P56856 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.42□□□□□ -1.7
CLDN18P56856 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN18P56856 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN18P56856 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN18P56856 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN18P56856 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN18P56856 AC116553.2-201ENST00000564203 463 ntBASIC4.42□□□□□ -1.7
CLDN18P56856 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN18P56856 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN18P56856 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.42□□□□□ -1.7
CLDN18P56856 SNX6P1-201ENST00000601728 1224 ntBASIC4.42□□□□□ -1.7
CLDN18P56856 AC104687.2-201ENST00000604442 342 ntBASIC4.42□□□□□ -1.7
CLDN18P56856 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.42□□□□□ -1.7
CLDN18P56856 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN18P56856 SAMMSON-226ENST00000642089 1582 ntBASIC4.42□□□□□ -1.7
CLDN18P56856 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CLDN18P56856 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.42□□□□□ -1.7
CLDN18P56856 AC063976.2-201ENST00000425667 3556 ntBASIC4.42□□□□□ -1.7
CLDN18P56856 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN18P56856 ZNF652P1-201ENST00000442420 1309 ntBASIC4.42□□□□□ -1.7
CLDN18P56856 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN18P56856 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN18P56856 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.41□□□□□ -1.7
CLDN18P56856 AC120338.1-201ENST00000625074 1541 ntBASIC4.41□□□□□ -1.7
CLDN18P56856 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CLDN18P56856 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CLDN18P56856 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CLDN18P56856 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLDN18P56856 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.41□□□□□ -1.7
CLDN18P56856 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLDN18P56856 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLDN18P56856 MIR365B-201ENST00000362317 111 ntBASIC4.41□□□□□ -1.7
CLDN18P56856 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLDN18P56856 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLDN18P56856 TBCAP2-201ENST00000416175 326 ntBASIC4.41□□□□□ -1.7
CLDN18P56856 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.41□□□□□ -1.7
CLDN18P56856 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.41□□□□□ -1.7
CLDN18P56856 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.41□□□□□ -1.7
CLDN18P56856 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.41□□□□□ -1.7
CLDN18P56856 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.41□□□□□ -1.7
CLDN18P56856 Z80107.2-201ENST00000445127 392 ntBASIC4.41□□□□□ -1.7
CLDN18P56856 AC000111.2-201ENST00000448200 210 ntBASIC4.41□□□□□ -1.7
CLDN18P56856 RAB28P3-201ENST00000448325 597 ntBASIC4.41□□□□□ -1.7
CLDN18P56856 AURKAPS2-201ENST00000454983 333 ntBASIC4.41□□□□□ -1.7
CLDN18P56856 AC022336.1-201ENST00000475510 337 ntBASIC4.41□□□□□ -1.7
CLDN18P56856 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.41□□□□□ -1.7
CLDN18P56856 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms