Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC067838.1-201ENST00000606064 577 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 Z95327.3-201ENST00000610385 572 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 AC019206.1-201ENST00000621938 425 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN6P56747 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN6P56747 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN6P56747 SMG1P4-204ENST00000523028 4131 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN6P56747 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN6P56747 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN6P56747 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN6P56747 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.7□□□□□ -1.66
CLDN6P56747 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN6P56747 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN6P56747 AL022322.2-201ENST00000624072 20397 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 AC091046.3-201ENST00000631455 1574 ntBASIC4.7□□□□□ -1.66
CLDN6P56747 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
CLDN6P56747 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN6P56747 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN6P56747 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN6P56747 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN6P56747 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.69□□□□□ -1.66
CLDN6P56747 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN6P56747 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN6P56747 CUL4AP1-201ENST00000514750 1863 ntBASIC4.69□□□□□ -1.66
CLDN6P56747 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN6P56747 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN6P56747 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN6P56747 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.69□□□□□ -1.66
CLDN6P56747 AC006210.2-201ENST00000367074 1545 ntBASIC4.69□□□□□ -1.66
CLDN6P56747 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLDN6P56747 OR4K15-201ENST00000305051 1216 ntBASIC4.69□□□□□ -1.66
CLDN6P56747 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.69□□□□□ -1.66
CLDN6P56747 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.69□□□□□ -1.66
CLDN6P56747 ATP5HP3-201ENST00000396994 486 ntBASIC4.69□□□□□ -1.66
CLDN6P56747 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.69□□□□□ -1.66
CLDN6P56747 KCTD10P1-201ENST00000434203 625 ntBASIC4.69□□□□□ -1.66
CLDN6P56747 TCEA1P3-201ENST00000443005 880 ntBASIC4.69□□□□□ -1.66
CLDN6P56747 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.69□□□□□ -1.66
CLDN6P56747 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.69□□□□□ -1.66
CLDN6P56747 HMGB1P4-201ENST00000455362 567 ntBASIC4.69□□□□□ -1.66
CLDN6P56747 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.69□□□□□ -1.66
CLDN6P56747 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.69□□□□□ -1.66
CLDN6P56747 RPS12P31-201ENST00000491419 398 ntBASIC4.69□□□□□ -1.66
CLDN6P56747 AC025674.1-201ENST00000507074 324 ntBASIC4.69□□□□□ -1.66
CLDN6P56747 SLC25A15P5-201ENST00000508033 253 ntBASIC4.69□□□□□ -1.66
CLDN6P56747 AC093824.1-201ENST00000508796 343 ntBASIC4.69□□□□□ -1.66
CLDN6P56747 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLDN6P56747 AC020937.1-201ENST00000519677 1013 ntBASIC4.69□□□□□ -1.66
CLDN6P56747 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.69□□□□□ -1.66
CLDN6P56747 AC068831.4-201ENST00000556118 109 ntBASIC4.69□□□□□ -1.66
CLDN6P56747 MIR4675-201ENST00000577898 77 ntBASIC4.69□□□□□ -1.66
CLDN6P56747 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.69□□□□□ -1.66
CLDN6P56747 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.69□□□□□ -1.66
CLDN6P56747 AC073091.2-201ENST00000603205 907 ntBASIC4.69□□□□□ -1.66
CLDN6P56747 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN6P56747 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN6P56747 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.69□□□□□ -1.66
CLDN6P56747 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLDN6P56747 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CLDN6P56747 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.69□□□□□ -1.66
CLDN6P56747 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN6P56747 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
CLDN6P56747 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CLDN6P56747 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN6P56747 AC083843.2-201ENST00000568248 6253 ntBASIC4.69□□□□□ -1.66
CLDN6P56747 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.69□□□□□ -1.66
CLDN6P56747 AC104623.2-202ENST00000623477 4002 ntBASIC4.69□□□□□ -1.66
CLDN6P56747 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN6P56747 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN6P56747 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN6P56747 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CLDN6P56747 AC010266.2-201ENST00000564741 3255 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN6P56747 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.68□□□□□ -1.66
CLDN6P56747 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN6P56747 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN6P56747 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.68□□□□□ -1.66
CLDN6P56747 AL672167.2-201ENST00000377164 879 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 MIR129-1-201ENST00000384972 72 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 SNORA79B-201ENST00000410557 148 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 AC002524.1-201ENST00000411687 547 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 ELOCP19-201ENST00000411919 318 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN6P56747 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN6P56747 SCAND3P1-201ENST00000439854 1060 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 TXNP2-201ENST00000443918 295 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN6P56747 AC007537.2-201ENST00000472093 511 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 AL049874.2-201ENST00000492636 288 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 RPS24P16-201ENST00000497294 392 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 AC022360.1-201ENST00000521058 340 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN6P56747 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.68□□□□□ -1.66
CLDN6P56747 AC027369.5-201ENST00000533838 755 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN6P56747 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.68□□□□□ -1.66
CLDN6P56747 AL109766.1-201ENST00000555080 552 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 AC234775.3-201ENST00000564612 656 ntBASIC4.68□□□□□ -1.66
CLDN6P56747 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms