Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC011755.1-201ENST00000623763 2049 ntBASIC5.24□□□□□ -1.57
LIMK1P53667 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
LIMK1P53667 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.24□□□□□ -1.57
LIMK1P53667 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
LIMK1P53667 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
LIMK1P53667 AC018809.2-201ENST00000602436 3823 ntBASIC5.24□□□□□ -1.57
LIMK1P53667 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.24□□□□□ -1.57
LIMK1P53667 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
LIMK1P53667 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.24□□□□□ -1.57
LIMK1P53667 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LIMK1P53667 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.24□□□□□ -1.57
LIMK1P53667 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LIMK1P53667 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LIMK1P53667 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LIMK1P53667 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.24□□□□□ -1.57
LIMK1P53667 AC019155.1-201ENST00000382242 574 ntBASIC5.24□□□□□ -1.57
LIMK1P53667 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
LIMK1P53667 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LIMK1P53667 RN7SKP27-201ENST00000410684 333 ntBASIC5.24□□□□□ -1.57
LIMK1P53667 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.24□□□□□ -1.57
LIMK1P53667 HYALP1-201ENST00000417674 1279 ntBASIC5.24□□□□□ -1.57
LIMK1P53667 AL158073.1-201ENST00000426848 1104 ntBASIC5.24□□□□□ -1.57
LIMK1P53667 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.24□□□□□ -1.57
LIMK1P53667 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.24□□□□□ -1.57
LIMK1P53667 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.24□□□□□ -1.57
LIMK1P53667 RPS4XP12-201ENST00000461747 709 ntBASIC5.24□□□□□ -1.57
LIMK1P53667 RN7SL354P-201ENST00000469282 294 ntBASIC5.24□□□□□ -1.57
LIMK1P53667 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.24□□□□□ -1.57
LIMK1P53667 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.24□□□□□ -1.57
LIMK1P53667 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.24□□□□□ -1.57
LIMK1P53667 AC021006.3-201ENST00000530771 192 ntBASIC5.24□□□□□ -1.57
LIMK1P53667 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.24□□□□□ -1.57
LIMK1P53667 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
LIMK1P53667 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.24□□□□□ -1.57
LIMK1P53667 BGLT3-201ENST00000564523 994 ntBASIC5.24□□□□□ -1.57
LIMK1P53667 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.24□□□□□ -1.57
LIMK1P53667 AL020997.2-201ENST00000602607 184 ntBASIC5.24□□□□□ -1.57
LIMK1P53667 AL031320.1-201ENST00000604177 357 ntBASIC5.24□□□□□ -1.57
LIMK1P53667 HIRAP1-201ENST00000605318 787 ntBASIC5.24□□□□□ -1.57
LIMK1P53667 AC131238.1-201ENST00000617135 328 ntBASIC5.24□□□□□ -1.57
LIMK1P53667 MIR7703-201ENST00000620784 77 ntBASIC5.24□□□□□ -1.57
LIMK1P53667 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.24□□□□□ -1.57
LIMK1P53667 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
LIMK1P53667 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
LIMK1P53667 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LIMK1P53667 ABCC13-202ENST00000463099 3842 ntBASIC5.24□□□□□ -1.57
LIMK1P53667 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LIMK1P53667 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LIMK1P53667 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.23□□□□□ -1.57
LIMK1P53667 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LIMK1P53667 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LIMK1P53667 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LIMK1P53667 RPL32P3-201ENST00000359025 275 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 RN7SKP95-201ENST00000362860 303 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 RNA5SP505-201ENST00000364748 108 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.23□□□□□ -1.57
LIMK1P53667 CCNB2P1-201ENST00000399411 1150 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 NUDT19P3-201ENST00000404698 555 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
LIMK1P53667 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.23□□□□□ -1.57
LIMK1P53667 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 OR13Z1P-201ENST00000416141 834 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 AC073136.2-201ENST00000417282 849 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 RPS20P1-201ENST00000434853 354 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 HMGB3P9-201ENST00000441799 583 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.23□□□□□ -1.57
LIMK1P53667 MTND2P25-201ENST00000449028 610 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.23□□□□□ -1.57
LIMK1P53667 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.23□□□□□ -1.57
LIMK1P53667 APOOP2-201ENST00000461561 539 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.23□□□□□ -1.57
LIMK1P53667 RPL7P40-201ENST00000481703 745 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 RPS17P5-201ENST00000498293 408 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LIMK1P53667 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.23□□□□□ -1.57
LIMK1P53667 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.23□□□□□ -1.57
LIMK1P53667 UBE2FP2-201ENST00000566646 462 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.23□□□□□ -1.57
LIMK1P53667 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.23□□□□□ -1.57
LIMK1P53667 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.23□□□□□ -1.57
LIMK1P53667 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.23□□□□□ -1.57
LIMK1P53667 MTCO2P22-201ENST00000603246 681 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 AC116447.1-201ENST00000613153 453 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 MIR6758-201ENST00000620653 63 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.23□□□□□ -1.57
LIMK1P53667 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.23□□□□□ -1.57
LIMK1P53667 AC009501.3-201ENST00000605001 1352 ntBASIC5.23□□□□□ -1.57
LIMK1P53667 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LIMK1P53667 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LIMK1P53667 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
LIMK1P53667 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LIMK1P53667 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.23□□□□□ -1.57
LIMK1P53667 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.22□□□□□ -1.57
LIMK1P53667 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LIMK1P53667 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LIMK1P53667 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LIMK1P53667 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LIMK1P53667 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LIMK1P53667 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.22□□□□□ -1.57
LIMK1P53667 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms