Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLCNKAP51800 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLCNKAP51800 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLCNKAP51800 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLCNKAP51800 AC114947.2-201ENST00000565748 2125 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLCNKAP51800 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLCNKAP51800 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLCNKAP51800 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLCNKAP51800 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLCNKAP51800 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.11□□□□□ -1.59
CLCNKAP51800 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.11□□□□□ -1.59
CLCNKAP51800 RNU1-106P-201ENST00000384382 164 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 RPL10P10-201ENST00000403509 664 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 AC233289.1-201ENST00000403700 508 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.11□□□□□ -1.59
CLCNKAP51800 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.11□□□□□ -1.59
CLCNKAP51800 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.11□□□□□ -1.59
CLCNKAP51800 DDX39BP1-205ENST00000422507 192 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.11□□□□□ -1.59
CLCNKAP51800 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.11□□□□□ -1.59
CLCNKAP51800 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLCNKAP51800 RPL19P16-201ENST00000433839 588 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 AC046176.1-201ENST00000435260 1170 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 PTMAP6-201ENST00000439110 327 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 CEACAMP7-201ENST00000444105 496 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 KNOP1P3-201ENST00000446933 426 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 NOP56P2-201ENST00000447491 769 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 AC090804.1-201ENST00000448870 490 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 AL133244.1-201ENST00000456007 258 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.11□□□□□ -1.59
CLCNKAP51800 RN7SL189P-201ENST00000468631 289 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 NPM1P17-201ENST00000479221 602 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 AC008410.1-201ENST00000483777 339 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.11□□□□□ -1.59
CLCNKAP51800 AC023424.1-201ENST00000496058 459 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLCNKAP51800 EIF3KP3-201ENST00000514461 639 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 AL671862.1-201ENST00000515851 349 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CLCNKAP51800 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.11□□□□□ -1.59
CLCNKAP51800 SOX5P1-201ENST00000524155 1127 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 AC138701.1-201ENST00000524329 714 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.11□□□□□ -1.59
CLCNKAP51800 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.11□□□□□ -1.59
CLCNKAP51800 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.11□□□□□ -1.59
CLCNKAP51800 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLCNKAP51800 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.11□□□□□ -1.59
CLCNKAP51800 MIR4760-201ENST00000585040 80 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.11□□□□□ -1.59
CLCNKAP51800 AC245884.10-201ENST00000597355 337 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 AC015849.2-201ENST00000605738 409 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 AC005021.1-201ENST00000608730 355 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 MIR8084-201ENST00000614105 89 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 AL162574.1-201ENST00000615702 950 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.11□□□□□ -1.59
CLCNKAP51800 AL356118.1-201ENST00000635272 1078 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.11□□□□□ -1.59
CLCNKAP51800 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.11□□□□□ -1.59
CLCNKAP51800 TCP1P3-201ENST00000414406 1498 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 AC006210.2-201ENST00000367074 1545 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLCNKAP51800 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLCNKAP51800 AC023421.1-201ENST00000590535 1785 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLCNKAP51800 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLCNKAP51800 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLCNKAP51800 THAP12P4-201ENST00000528321 2266 ntBASIC5.11□□□□□ -1.59
CLCNKAP51800 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CLCNKAP51800 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLCNKAP51800 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
CLCNKAP51800 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CLCNKAP51800 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCNKAP51800 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCNKAP51800 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCNKAP51800 MIR589-201ENST00000385238 99 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
CLCNKAP51800 RNA5SP296-201ENST00000410523 111 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCNKAP51800 HSPD1P12-201ENST00000429127 1069 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCNKAP51800 GAPDHP58-201ENST00000438477 1006 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 AC073850.1-201ENST00000449243 255 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 AC022431.1-201ENST00000450941 438 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 MTATP6P14-201ENST00000455189 673 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 RPL7AP6-201ENST00000477943 801 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 RN7SL814P-201ENST00000487715 300 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 AC004453.1-201ENST00000487895 408 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 TPT1P8-201ENST00000510120 555 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 AC147055.3-201ENST00000510547 851 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCNKAP51800 C1DP5-201ENST00000525775 383 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCNKAP51800 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCNKAP51800 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCNKAP51800 AC092490.3-201ENST00000545370 572 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 AC125612.1-201ENST00000547580 377 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCNKAP51800 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms