Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 NR1H5P-201ENST00000452683 1377 ntBASIC4.27□□□□□ -1.73
SRP9P49458 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.27□□□□□ -1.73
SRP9P49458 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SRP9P49458 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRP9P49458 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SRP9P49458 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRP9P49458 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.27□□□□□ -1.73
SRP9P49458 RNU1-94P-201ENST00000362627 173 ntBASIC4.27□□□□□ -1.73
SRP9P49458 RNU4-4P-201ENST00000364588 130 ntBASIC4.27□□□□□ -1.73
SRP9P49458 MIR708-201ENST00000390708 88 ntBASIC4.27□□□□□ -1.73
SRP9P49458 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.27□□□□□ -1.73
SRP9P49458 GJA6P-201ENST00000415117 1042 ntBASIC4.27□□□□□ -1.73
SRP9P49458 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.27□□□□□ -1.73
SRP9P49458 RPS27P18-201ENST00000431701 247 ntBASIC4.27□□□□□ -1.73
SRP9P49458 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.27□□□□□ -1.73
SRP9P49458 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.27□□□□□ -1.73
SRP9P49458 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.27□□□□□ -1.73
SRP9P49458 AL450023.3-201ENST00000440592 271 ntBASIC4.27□□□□□ -1.73
SRP9P49458 AL137845.2-201ENST00000444292 988 ntBASIC4.27□□□□□ -1.73
SRP9P49458 TDGF1P1-201ENST00000445734 527 ntBASIC4.27□□□□□ -1.73
SRP9P49458 OTX2P1-201ENST00000450956 354 ntBASIC4.27□□□□□ -1.73
SRP9P49458 RBMY2TP-201ENST00000451162 947 ntBASIC4.27□□□□□ -1.73
SRP9P49458 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.27□□□□□ -1.73
SRP9P49458 FGF7P3-201ENST00000454645 303 ntBASIC4.27□□□□□ -1.73
SRP9P49458 RPL23AP37-201ENST00000479658 549 ntBASIC4.27□□□□□ -1.73
SRP9P49458 RNA5SP228-201ENST00000516232 133 ntBASIC4.27□□□□□ -1.73
SRP9P49458 AP002981.1-201ENST00000517692 975 ntBASIC4.27□□□□□ -1.73
SRP9P49458 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.27□□□□□ -1.73
SRP9P49458 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.27□□□□□ -1.73
SRP9P49458 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.27□□□□□ -1.73
SRP9P49458 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SRP9P49458 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.27□□□□□ -1.73
SRP9P49458 AC044860.2-201ENST00000561005 179 ntBASIC4.27□□□□□ -1.73
SRP9P49458 AC122134.1-201ENST00000565664 1104 ntBASIC4.27□□□□□ -1.73
SRP9P49458 AC019206.1-201ENST00000621938 425 ntBASIC4.27□□□□□ -1.73
SRP9P49458 AC018445.2-201ENST00000622987 260 ntBASIC4.27□□□□□ -1.73
SRP9P49458 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRP9P49458 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.27□□□□□ -1.73
SRP9P49458 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
SRP9P49458 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRP9P49458 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRP9P49458 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SRP9P49458 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SRP9P49458 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRP9P49458 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SRP9P49458 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.26□□□□□ -1.73
SRP9P49458 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SRP9P49458 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRP9P49458 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRP9P49458 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SRP9P49458 RN7SKP104-201ENST00000362605 328 ntBASIC4.26□□□□□ -1.73
SRP9P49458 SNORA74A-201ENST00000364089 198 ntBASIC4.26□□□□□ -1.73
SRP9P49458 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
SRP9P49458 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SRP9P49458 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SRP9P49458 LRRC37BP1-201ENST00000398851 714 ntBASIC4.26□□□□□ -1.73
SRP9P49458 LAP3P1-201ENST00000403648 294 ntBASIC4.26□□□□□ -1.73
SRP9P49458 AL136116.2-201ENST00000404020 785 ntBASIC4.26□□□□□ -1.73
SRP9P49458 AP002530.1-201ENST00000405705 684 ntBASIC4.26□□□□□ -1.73
SRP9P49458 SNORA77-201ENST00000408716 125 ntBASIC4.26□□□□□ -1.73
SRP9P49458 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.26□□□□□ -1.73
SRP9P49458 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.26□□□□□ -1.73
SRP9P49458 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SRP9P49458 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SRP9P49458 PRPF38AP2-201ENST00000438179 851 ntBASIC4.26□□□□□ -1.73
SRP9P49458 RPS29P9-201ENST00000440360 171 ntBASIC4.26□□□□□ -1.73
SRP9P49458 ARL4AP3-201ENST00000441452 574 ntBASIC4.26□□□□□ -1.73
SRP9P49458 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.26□□□□□ -1.73
SRP9P49458 IGHV5-78-201ENST00000450948 295 ntBASIC4.26□□□□□ -1.73
SRP9P49458 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.26□□□□□ -1.73
SRP9P49458 AC133473.1-201ENST00000455173 299 ntBASIC4.26□□□□□ -1.73
SRP9P49458 EIF2S2P5-201ENST00000457635 968 ntBASIC4.26□□□□□ -1.73
SRP9P49458 RPS17P2-201ENST00000461663 408 ntBASIC4.26□□□□□ -1.73
SRP9P49458 RN7SL319P-201ENST00000480656 221 ntBASIC4.26□□□□□ -1.73
SRP9P49458 AC098583.1-201ENST00000480875 255 ntBASIC4.26□□□□□ -1.73
SRP9P49458 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.26□□□□□ -1.73
SRP9P49458 NDUFB4P12-201ENST00000513465 390 ntBASIC4.26□□□□□ -1.73
SRP9P49458 MTCYBP19-201ENST00000517463 1124 ntBASIC4.26□□□□□ -1.73
SRP9P49458 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.26□□□□□ -1.73
SRP9P49458 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.26□□□□□ -1.73
SRP9P49458 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.26□□□□□ -1.73
SRP9P49458 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SRP9P49458 GSTP1P1-201ENST00000548078 319 ntBASIC4.26□□□□□ -1.73
SRP9P49458 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.26□□□□□ -1.73
SRP9P49458 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.26□□□□□ -1.73
SRP9P49458 TVP23CP2-201ENST00000571473 623 ntBASIC4.26□□□□□ -1.73
SRP9P49458 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.26□□□□□ -1.73
SRP9P49458 EIF1P5-201ENST00000585002 234 ntBASIC4.26□□□□□ -1.73
SRP9P49458 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.26□□□□□ -1.73
SRP9P49458 AC068870.2-201ENST00000620635 389 ntBASIC4.26□□□□□ -1.73
SRP9P49458 AC015804.1-201ENST00000622935 435 ntBASIC4.26□□□□□ -1.73
SRP9P49458 AC079298.2-201ENST00000623885 459 ntBASIC4.26□□□□□ -1.73
SRP9P49458 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.26□□□□□ -1.73
SRP9P49458 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.26□□□□□ -1.73
SRP9P49458 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRP9P49458 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRP9P49458 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRP9P49458 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SRP9P49458 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.26□□□□□ -1.73
SRP9P49458 AC093535.2-201ENST00000624769 2326 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms