Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.21□□□□□ -1.58
LHX1P48742 AGGF1P9-201ENST00000561884 913 ntBASIC5.21□□□□□ -1.58
LHX1P48742 UBE2FP2-201ENST00000566646 462 ntBASIC5.21□□□□□ -1.58
LHX1P48742 MTND2P13-201ENST00000577438 1039 ntBASIC5.21□□□□□ -1.58
LHX1P48742 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.21□□□□□ -1.58
LHX1P48742 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.21□□□□□ -1.58
LHX1P48742 AL391358.1-201ENST00000605342 190 ntBASIC5.21□□□□□ -1.58
LHX1P48742 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LHX1P48742 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.21□□□□□ -1.58
LHX1P48742 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
LHX1P48742 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LHX1P48742 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LHX1P48742 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LHX1P48742 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LHX1P48742 AC008758.3-201ENST00000507003 1829 ntBASIC5.2□□□□□ -1.58
LHX1P48742 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LHX1P48742 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LHX1P48742 MTND4P21-201ENST00000453886 1357 ntBASIC5.2□□□□□ -1.58
LHX1P48742 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.2□□□□□ -1.58
LHX1P48742 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LHX1P48742 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LHX1P48742 RNA5SP105-201ENST00000391123 113 ntBASIC5.2□□□□□ -1.58
LHX1P48742 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LHX1P48742 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.2□□□□□ -1.58
LHX1P48742 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.2□□□□□ -1.58
LHX1P48742 FAR1P1-201ENST00000427163 934 ntBASIC5.2□□□□□ -1.58
LHX1P48742 MTND4LP7-201ENST00000431728 294 ntBASIC5.2□□□□□ -1.58
LHX1P48742 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.2□□□□□ -1.58
LHX1P48742 AC000111.2-201ENST00000448200 210 ntBASIC5.2□□□□□ -1.58
LHX1P48742 OR11I1P-201ENST00000486033 954 ntBASIC5.2□□□□□ -1.58
LHX1P48742 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LHX1P48742 RNA5SP392-201ENST00000516905 112 ntBASIC5.2□□□□□ -1.58
LHX1P48742 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.2□□□□□ -1.58
LHX1P48742 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.2□□□□□ -1.58
LHX1P48742 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.2□□□□□ -1.58
LHX1P48742 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.2□□□□□ -1.58
LHX1P48742 EIF4A2P5-201ENST00000529914 499 ntBASIC5.2□□□□□ -1.58
LHX1P48742 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.2□□□□□ -1.58
LHX1P48742 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.2□□□□□ -1.58
LHX1P48742 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.2□□□□□ -1.58
LHX1P48742 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LHX1P48742 AL512782.1-201ENST00000603093 364 ntBASIC5.2□□□□□ -1.58
LHX1P48742 AL133247.2-201ENST00000603236 482 ntBASIC5.2□□□□□ -1.58
LHX1P48742 AC020923.1-201ENST00000624021 917 ntBASIC5.2□□□□□ -1.58
LHX1P48742 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.2□□□□□ -1.58
LHX1P48742 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.2□□□□□ -1.58
LHX1P48742 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
LHX1P48742 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.2□□□□□ -1.58
LHX1P48742 DDX6P1-205ENST00000441966 1436 ntBASIC5.2□□□□□ -1.58
LHX1P48742 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.2□□□□□ -1.58
LHX1P48742 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.2□□□□□ -1.58
LHX1P48742 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LHX1P48742 ZNF652P1-201ENST00000442420 1309 ntBASIC5.2□□□□□ -1.58
LHX1P48742 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LHX1P48742 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LHX1P48742 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.2□□□□□ -1.58
LHX1P48742 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.2□□□□□ -1.58
LHX1P48742 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LHX1P48742 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LHX1P48742 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LHX1P48742 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LHX1P48742 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
LHX1P48742 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LHX1P48742 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.19□□□□□ -1.58
LHX1P48742 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.19□□□□□ -1.58
LHX1P48742 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LHX1P48742 AC093849.1-201ENST00000563631 2209 ntBASIC5.19□□□□□ -1.58
LHX1P48742 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LHX1P48742 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LHX1P48742 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LHX1P48742 RNU6-1263P-201ENST00000384601 106 ntBASIC5.19□□□□□ -1.58
LHX1P48742 MIR585-201ENST00000384887 94 ntBASIC5.19□□□□□ -1.58
LHX1P48742 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LHX1P48742 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LHX1P48742 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LHX1P48742 CCNB2P1-201ENST00000399411 1150 ntBASIC5.19□□□□□ -1.58
LHX1P48742 USP9YP19-201ENST00000412165 485 ntBASIC5.19□□□□□ -1.58
LHX1P48742 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.19□□□□□ -1.58
LHX1P48742 AC092162.1-201ENST00000432828 434 ntBASIC5.19□□□□□ -1.58
LHX1P48742 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.19□□□□□ -1.58
LHX1P48742 VN1R48P-201ENST00000448149 1036 ntBASIC5.19□□□□□ -1.58
LHX1P48742 MTND5P8-201ENST00000449817 1083 ntBASIC5.19□□□□□ -1.58
LHX1P48742 RPS5P7-201ENST00000456664 608 ntBASIC5.19□□□□□ -1.58
LHX1P48742 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LHX1P48742 RNU6-889P-201ENST00000517189 103 ntBASIC5.19□□□□□ -1.58
LHX1P48742 IGKV1-32-201ENST00000519290 311 ntBASIC5.19□□□□□ -1.58
LHX1P48742 BUD31P1-201ENST00000521828 359 ntBASIC5.19□□□□□ -1.58
LHX1P48742 RPL23AP53-201ENST00000521854 457 ntBASIC5.19□□□□□ -1.58
LHX1P48742 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.19□□□□□ -1.58
LHX1P48742 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.19□□□□□ -1.58
LHX1P48742 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.19□□□□□ -1.58
LHX1P48742 AC091042.1-201ENST00000579213 173 ntBASIC5.19□□□□□ -1.58
LHX1P48742 SNORD39.2-201ENST00000579995 76 ntBASIC5.19□□□□□ -1.58
LHX1P48742 SNORA74C-1-201ENST00000580726 201 ntBASIC5.19□□□□□ -1.58
LHX1P48742 FAM106CP-201ENST00000582212 507 ntBASIC5.19□□□□□ -1.58
LHX1P48742 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.19□□□□□ -1.58
LHX1P48742 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.19□□□□□ -1.58
LHX1P48742 AC011453.2-201ENST00000603737 729 ntBASIC5.19□□□□□ -1.58
LHX1P48742 AL121932.1-201ENST00000605542 214 ntBASIC5.19□□□□□ -1.58
LHX1P48742 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms