Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.11□□□□□ -1.59
BRCC3P46736 MTATP6P25-201ENST00000574491 261 ntBASIC5.11□□□□□ -1.59
BRCC3P46736 AC073091.2-201ENST00000603205 907 ntBASIC5.11□□□□□ -1.59
BRCC3P46736 SNORA35B-201ENST00000607417 129 ntBASIC5.11□□□□□ -1.59
BRCC3P46736 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.11□□□□□ -1.59
BRCC3P46736 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BRCC3P46736 AC007342.9-201ENST00000623877 1385 ntBASIC5.11□□□□□ -1.59
BRCC3P46736 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
BRCC3P46736 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.11□□□□□ -1.59
BRCC3P46736 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.11□□□□□ -1.59
BRCC3P46736 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BRCC3P46736 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.11□□□□□ -1.59
BRCC3P46736 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.11□□□□□ -1.59
BRCC3P46736 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.11□□□□□ -1.59
BRCC3P46736 SMG1P6-201ENST00000532337 2930 ntBASIC5.1□□□□□ -1.59
BRCC3P46736 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRCC3P46736 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRCC3P46736 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRCC3P46736 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRCC3P46736 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
BRCC3P46736 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
BRCC3P46736 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRCC3P46736 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRCC3P46736 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.1□□□□□ -1.59
BRCC3P46736 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRCC3P46736 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
BRCC3P46736 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
BRCC3P46736 RNU6-249P-201ENST00000363016 102 ntBASIC5.1□□□□□ -1.59
BRCC3P46736 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
BRCC3P46736 AC136624.1-201ENST00000400791 413 ntBASIC5.1□□□□□ -1.59
BRCC3P46736 ATG4AP1-201ENST00000416893 538 ntBASIC5.1□□□□□ -1.59
BRCC3P46736 RFESDP1-201ENST00000422350 461 ntBASIC5.1□□□□□ -1.59
BRCC3P46736 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.1□□□□□ -1.59
BRCC3P46736 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.1□□□□□ -1.59
BRCC3P46736 AL157385.1-201ENST00000446973 268 ntBASIC5.1□□□□□ -1.59
BRCC3P46736 MRPL35P2-201ENST00000448009 511 ntBASIC5.1□□□□□ -1.59
BRCC3P46736 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.1□□□□□ -1.59
BRCC3P46736 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.1□□□□□ -1.59
BRCC3P46736 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.1□□□□□ -1.59
BRCC3P46736 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
BRCC3P46736 CEACAMP10-202ENST00000495431 496 ntBASIC5.1□□□□□ -1.59
BRCC3P46736 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.1□□□□□ -1.59
BRCC3P46736 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.1□□□□□ -1.59
BRCC3P46736 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.1□□□□□ -1.59
BRCC3P46736 SNORD116-30-201ENST00000516468 85 ntBASIC5.1□□□□□ -1.59
BRCC3P46736 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.1□□□□□ -1.59
BRCC3P46736 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.1□□□□□ -1.59
BRCC3P46736 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.1□□□□□ -1.59
BRCC3P46736 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.1□□□□□ -1.59
BRCC3P46736 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.1□□□□□ -1.59
BRCC3P46736 AC007382.1-201ENST00000624376 2618 ntBASIC5.1□□□□□ -1.59
BRCC3P46736 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.1□□□□□ -1.59
BRCC3P46736 AC073869.10-201ENST00000642016 354 ntBASIC5.1□□□□□ -1.59
BRCC3P46736 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
BRCC3P46736 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRCC3P46736 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
BRCC3P46736 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
BRCC3P46736 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
BRCC3P46736 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
BRCC3P46736 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
BRCC3P46736 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
BRCC3P46736 SOCS5P3-201ENST00000425115 1576 ntBASIC5.09□□□□□ -1.59
BRCC3P46736 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
BRCC3P46736 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.09□□□□□ -1.59
BRCC3P46736 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
BRCC3P46736 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
BRCC3P46736 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.09□□□□□ -1.59
BRCC3P46736 SNORA70F-201ENST00000384142 135 ntBASIC5.09□□□□□ -1.59
BRCC3P46736 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.09□□□□□ -1.59
BRCC3P46736 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.09□□□□□ -1.59
BRCC3P46736 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.09□□□□□ -1.59
BRCC3P46736 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.09□□□□□ -1.59
BRCC3P46736 AC016712.1-201ENST00000431088 378 ntBASIC5.09□□□□□ -1.59
BRCC3P46736 AC097523.2-201ENST00000435551 652 ntBASIC5.09□□□□□ -1.59
BRCC3P46736 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
BRCC3P46736 CYCSP24-201ENST00000445119 316 ntBASIC5.09□□□□□ -1.59
BRCC3P46736 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.09□□□□□ -1.59
BRCC3P46736 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.09□□□□□ -1.59
BRCC3P46736 AC079168.2-201ENST00000453977 416 ntBASIC5.09□□□□□ -1.59
BRCC3P46736 MTCYBP14-201ENST00000457471 715 ntBASIC5.09□□□□□ -1.59
BRCC3P46736 OR52A4P-201ENST00000472867 958 ntBASIC5.09□□□□□ -1.59
BRCC3P46736 RN7SL481P-201ENST00000477764 299 ntBASIC5.09□□□□□ -1.59
BRCC3P46736 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.09□□□□□ -1.59
BRCC3P46736 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.09□□□□□ -1.59
BRCC3P46736 AC108043.1-201ENST00000512696 574 ntBASIC5.09□□□□□ -1.59
BRCC3P46736 CCNHP1-201ENST00000513311 678 ntBASIC5.09□□□□□ -1.59
BRCC3P46736 Y_RNA.719-201ENST00000517156 106 ntBASIC5.09□□□□□ -1.59
BRCC3P46736 RN7SKP92-201ENST00000517266 244 ntBASIC5.09□□□□□ -1.59
BRCC3P46736 AC105031.1-201ENST00000518550 476 ntBASIC5.09□□□□□ -1.59
BRCC3P46736 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.09□□□□□ -1.59
BRCC3P46736 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.09□□□□□ -1.59
BRCC3P46736 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.09□□□□□ -1.59
BRCC3P46736 AC006272.2-201ENST00000594725 163 ntBASIC5.09□□□□□ -1.59
BRCC3P46736 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.09□□□□□ -1.59
BRCC3P46736 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.09□□□□□ -1.59
BRCC3P46736 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
BRCC3P46736 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
BRCC3P46736 AC093849.1-201ENST00000563631 2209 ntBASIC5.09□□□□□ -1.59
BRCC3P46736 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
BRCC3P46736 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms