Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.28□□□□□ -1.56
SSR1P43307 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.28□□□□□ -1.56
SSR1P43307 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSR1P43307 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSR1P43307 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSR1P43307 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.28□□□□□ -1.56
SSR1P43307 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.28□□□□□ -1.56
SSR1P43307 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.28□□□□□ -1.56
SSR1P43307 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SSR1P43307 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.27□□□□□ -1.57
SSR1P43307 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
SSR1P43307 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSR1P43307 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSR1P43307 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.27□□□□□ -1.57
SSR1P43307 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSR1P43307 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSR1P43307 RNA5SP183-201ENST00000362452 119 ntBASIC5.27□□□□□ -1.57
SSR1P43307 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SSR1P43307 RNA5SP146-201ENST00000410743 123 ntBASIC5.27□□□□□ -1.57
SSR1P43307 CYP1D1P-201ENST00000416662 1433 ntBASIC5.27□□□□□ -1.57
SSR1P43307 RPL36AP10-201ENST00000421785 322 ntBASIC5.27□□□□□ -1.57
SSR1P43307 OR5M12P-201ENST00000423388 929 ntBASIC5.27□□□□□ -1.57
SSR1P43307 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.27□□□□□ -1.57
SSR1P43307 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.27□□□□□ -1.57
SSR1P43307 OR52B5P-201ENST00000435337 951 ntBASIC5.27□□□□□ -1.57
SSR1P43307 AC245047.2-201ENST00000441060 530 ntBASIC5.27□□□□□ -1.57
SSR1P43307 RPL7AP61-201ENST00000443410 636 ntBASIC5.27□□□□□ -1.57
SSR1P43307 CASP3P1-201ENST00000446037 609 ntBASIC5.27□□□□□ -1.57
SSR1P43307 FAR2P1-206ENST00000449736 709 ntBASIC5.27□□□□□ -1.57
SSR1P43307 AURKAPS1-201ENST00000451805 1212 ntBASIC5.27□□□□□ -1.57
SSR1P43307 AL691482.1-201ENST00000453255 87 ntBASIC5.27□□□□□ -1.57
SSR1P43307 RN7SKP260-201ENST00000516907 149 ntBASIC5.27□□□□□ -1.57
SSR1P43307 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.27□□□□□ -1.57
SSR1P43307 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSR1P43307 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.27□□□□□ -1.57
SSR1P43307 AGGF1P9-201ENST00000561884 913 ntBASIC5.27□□□□□ -1.57
SSR1P43307 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.27□□□□□ -1.57
SSR1P43307 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
SSR1P43307 SNORD91B-202ENST00000608459 222 ntBASIC5.27□□□□□ -1.57
SSR1P43307 OR6R2P-201ENST00000609216 300 ntBASIC5.27□□□□□ -1.57
SSR1P43307 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.27□□□□□ -1.57
SSR1P43307 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.27□□□□□ -1.57
SSR1P43307 OR52B5P-202ENST00000641118 1110 ntBASIC5.27□□□□□ -1.57
SSR1P43307 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.27□□□□□ -1.57
SSR1P43307 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.27□□□□□ -1.57
SSR1P43307 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.27□□□□□ -1.57
SSR1P43307 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSR1P43307 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSR1P43307 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SSR1P43307 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSR1P43307 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSR1P43307 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSR1P43307 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSR1P43307 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.26□□□□□ -1.57
SSR1P43307 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SSR1P43307 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
SSR1P43307 SNORA66-201ENST00000384792 133 ntBASIC5.26□□□□□ -1.57
SSR1P43307 MIR1286-201ENST00000408112 78 ntBASIC5.26□□□□□ -1.57
SSR1P43307 SNORA77-201ENST00000408716 125 ntBASIC5.26□□□□□ -1.57
SSR1P43307 AC009237.10-201ENST00000414112 510 ntBASIC5.26□□□□□ -1.57
SSR1P43307 MTND4LP13-201ENST00000425022 298 ntBASIC5.26□□□□□ -1.57
SSR1P43307 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.26□□□□□ -1.57
SSR1P43307 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.26□□□□□ -1.57
SSR1P43307 AC073052.1-201ENST00000440417 714 ntBASIC5.26□□□□□ -1.57
SSR1P43307 AL356981.1-201ENST00000454879 684 ntBASIC5.26□□□□□ -1.57
SSR1P43307 HMGB1P4-201ENST00000455362 567 ntBASIC5.26□□□□□ -1.57
SSR1P43307 S100A11P1-201ENST00000477525 312 ntBASIC5.26□□□□□ -1.57
SSR1P43307 RN7SL441P-201ENST00000492388 296 ntBASIC5.26□□□□□ -1.57
SSR1P43307 RPS6P4-201ENST00000494693 758 ntBASIC5.26□□□□□ -1.57
SSR1P43307 ATP5LP3-201ENST00000514223 304 ntBASIC5.26□□□□□ -1.57
SSR1P43307 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.26□□□□□ -1.57
SSR1P43307 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.26□□□□□ -1.57
SSR1P43307 AC012339.2-201ENST00000523996 453 ntBASIC5.26□□□□□ -1.57
SSR1P43307 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSR1P43307 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.26□□□□□ -1.57
SSR1P43307 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.26□□□□□ -1.57
SSR1P43307 AL121839.1-201ENST00000556233 1185 ntBASIC5.26□□□□□ -1.57
SSR1P43307 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.26□□□□□ -1.57
SSR1P43307 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSR1P43307 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.26□□□□□ -1.57
SSR1P43307 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.26□□□□□ -1.57
SSR1P43307 TAS2R6P-201ENST00000605022 826 ntBASIC5.26□□□□□ -1.57
SSR1P43307 AL121873.1-201ENST00000616013 524 ntBASIC5.26□□□□□ -1.57
SSR1P43307 AC022960.2-201ENST00000616300 666 ntBASIC5.26□□□□□ -1.57
SSR1P43307 RMST_9.1-201ENST00000619945 193 ntBASIC5.26□□□□□ -1.57
SSR1P43307 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.26□□□□□ -1.57
SSR1P43307 MIR4302-201ENST00000638058 60 ntBASIC5.26□□□□□ -1.57
SSR1P43307 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SSR1P43307 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SSR1P43307 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSR1P43307 AC068446.1-201ENST00000556425 1549 ntBASIC5.26□□□□□ -1.57
SSR1P43307 PANDAR-201ENST00000629595 1506 ntBASIC5.26□□□□□ -1.57
SSR1P43307 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SSR1P43307 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.26□□□□□ -1.57
SSR1P43307 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.26□□□□□ -1.57
SSR1P43307 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSR1P43307 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.26□□□□□ -1.57
SSR1P43307 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SSR1P43307 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SSR1P43307 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms