Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXC13P31276 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.41□□□□□ -1.54
HOXC13P31276 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC13P31276 AC134349.2-201ENST00000535136 910 ntBASIC5.41□□□□□ -1.54
HOXC13P31276 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.41□□□□□ -1.54
HOXC13P31276 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC13P31276 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC13P31276 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC13P31276 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.41□□□□□ -1.54
HOXC13P31276 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXC13P31276 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC13P31276 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC13P31276 AC009032.1-201ENST00000617574 431 ntBASIC5.41□□□□□ -1.54
HOXC13P31276 AC009704.2-201ENST00000618739 483 ntBASIC5.41□□□□□ -1.54
HOXC13P31276 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC13P31276 AC103798.2-201ENST00000624292 632 ntBASIC5.41□□□□□ -1.54
HOXC13P31276 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC13P31276 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC13P31276 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC13P31276 BMS1P21-201ENST00000634565 365 ntBASIC5.41□□□□□ -1.54
HOXC13P31276 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC13P31276 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC13P31276 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HOXC13P31276 PANDAR-201ENST00000629595 1506 ntBASIC5.41□□□□□ -1.54
HOXC13P31276 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
HOXC13P31276 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC13P31276 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC13P31276 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC13P31276 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
HOXC13P31276 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC13P31276 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.41□□□□□ -1.54
HOXC13P31276 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXC13P31276 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC13P31276 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
HOXC13P31276 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXC13P31276 AC104260.2-201ENST00000623551 3497 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 SNURFL-201ENST00000309296 343 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC13P31276 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC13P31276 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC13P31276 MTND3P20-201ENST00000407663 186 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 RPL26P37-201ENST00000411983 438 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXC13P31276 OR2AM1P-201ENST00000422137 422 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 RPL12P34-201ENST00000424532 479 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 RPS4XP16-201ENST00000427198 791 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.4□□□□□ -1.54
HOXC13P31276 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC13P31276 TRIM60P13-201ENST00000432350 1283 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 AL161722.2-201ENST00000434731 981 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.4□□□□□ -1.54
HOXC13P31276 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXC13P31276 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXC13P31276 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXC13P31276 TPT1P13-201ENST00000449760 499 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 AC092324.1-201ENST00000468671 324 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 RN7SL205P-201ENST00000490174 284 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 CEACAMP10-202ENST00000495431 496 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 AC010627.1-201ENST00000503819 1294 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HOXC13P31276 PGBD4P4-201ENST00000509673 613 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 AF186190.1-201ENST00000517470 480 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 NPM1P6-201ENST00000521088 871 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 AC024940.3-201ENST00000538551 316 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.4□□□□□ -1.54
HOXC13P31276 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXC13P31276 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXC13P31276 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXC13P31276 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXC13P31276 RN7SL52P-201ENST00000584271 284 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.4□□□□□ -1.54
HOXC13P31276 AC011447.4-201ENST00000587562 111 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 MIMT1-201ENST00000597105 1050 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 AC026790.2-201ENST00000606282 430 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 AL008729.2-201ENST00000606393 473 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 AC093799.2-201ENST00000610062 578 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXC13P31276 RN7SL722P-201ENST00000617780 284 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 RN7SL565P-201ENST00000618246 284 ntBASIC5.4□□□□□ -1.54
HOXC13P31276 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXC13P31276 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.4□□□□□ -1.54
HOXC13P31276 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
HOXC13P31276 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HOXC13P31276 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
HOXC13P31276 INTS6P1-201ENST00000504674 2530 ntBASIC5.4□□□□□ -1.55
HOXC13P31276 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
HOXC13P31276 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
HOXC13P31276 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
HOXC13P31276 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC13P31276 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HOXC13P31276 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC13P31276 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC13P31276 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HOXC13P31276 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.39□□□□□ -1.55
HOXC13P31276 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HOXC13P31276 AC011155.1-201ENST00000316512 456 ntBASIC5.39□□□□□ -1.55
HOXC13P31276 RNA5SP455-201ENST00000365190 119 ntBASIC5.39□□□□□ -1.55
HOXC13P31276 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.39□□□□□ -1.55
HOXC13P31276 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HOXC13P31276 GSTM3P2-201ENST00000412746 530 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms