Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC084337.1-201ENST00000524809 686 ntBASIC6.82□□□□□ -1.32
NFKB1P19838 AP002812.4-201ENST00000532139 286 ntBASIC6.82□□□□□ -1.32
NFKB1P19838 AP001804.2-201ENST00000533932 910 ntBASIC6.82□□□□□ -1.32
NFKB1P19838 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.82□□□□□ -1.32
NFKB1P19838 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.82□□□□□ -1.32
NFKB1P19838 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC6.82□□□□□ -1.32
NFKB1P19838 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NFKB1P19838 AL512360.1-201ENST00000555346 234 ntBASIC6.82□□□□□ -1.32
NFKB1P19838 RN7SL657P-201ENST00000582431 293 ntBASIC6.82□□□□□ -1.32
NFKB1P19838 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.82□□□□□ -1.32
NFKB1P19838 AP001429.1-201ENST00000602568 530 ntBASIC6.82□□□□□ -1.32
NFKB1P19838 AL953862.2-201ENST00000603089 820 ntBASIC6.82□□□□□ -1.32
NFKB1P19838 AC139493.1-201ENST00000604368 397 ntBASIC6.82□□□□□ -1.32
NFKB1P19838 AC112191.3-201ENST00000604371 277 ntBASIC6.82□□□□□ -1.32
NFKB1P19838 BNIP3P10-201ENST00000605360 577 ntBASIC6.82□□□□□ -1.32
NFKB1P19838 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
NFKB1P19838 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.82□□□□□ -1.32
NFKB1P19838 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.82□□□□□ -1.32
NFKB1P19838 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.82□□□□□ -1.32
NFKB1P19838 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.82□□□□□ -1.32
NFKB1P19838 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.82□□□□□ -1.32
NFKB1P19838 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC6.82□□□□□ -1.32
NFKB1P19838 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.82□□□□□ -1.32
NFKB1P19838 MTND5P42-201ENST00000637720 498 ntBASIC6.82□□□□□ -1.32
NFKB1P19838 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NFKB1P19838 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NFKB1P19838 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
NFKB1P19838 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NFKB1P19838 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.82□□□□□ -1.32
NFKB1P19838 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
NFKB1P19838 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
NFKB1P19838 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.81□□□□□ -1.32
NFKB1P19838 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.81□□□□□ -1.32
NFKB1P19838 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NFKB1P19838 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NFKB1P19838 AC007012.2-201ENST00000623206 1676 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NFKB1P19838 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NFKB1P19838 CYP2G2P-201ENST00000594920 1485 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NFKB1P19838 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
NFKB1P19838 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
NFKB1P19838 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
NFKB1P19838 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NFKB1P19838 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.81□□□□□ -1.32
NFKB1P19838 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.81□□□□□ -1.32
NFKB1P19838 RNU6-483P-201ENST00000384088 108 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 RNU6-878P-201ENST00000384578 110 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 MIR27A-201ENST00000385073 78 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NFKB1P19838 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NFKB1P19838 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NFKB1P19838 AL359694.1-201ENST00000403247 604 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 RN7SKP91-201ENST00000410852 288 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 RPLP1P10-201ENST00000413972 339 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NFKB1P19838 AC005033.1-201ENST00000428904 813 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.81□□□□□ -1.32
NFKB1P19838 RPL37P21-201ENST00000435890 276 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.81□□□□□ -1.32
NFKB1P19838 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.81□□□□□ -1.32
NFKB1P19838 RPL7AP23-201ENST00000482625 776 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 AC012170.1-201ENST00000495139 359 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.81□□□□□ -1.32
NFKB1P19838 AC108064.1-201ENST00000513791 460 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC6.81□□□□□ -1.32
NFKB1P19838 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.81□□□□□ -1.32
NFKB1P19838 AC109635.6-201ENST00000525487 1113 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 AC130366.1-201ENST00000526505 1192 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 AC022878.1-201ENST00000530684 149 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC6.81□□□□□ -1.32
NFKB1P19838 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.81□□□□□ -1.32
NFKB1P19838 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.81□□□□□ -1.32
NFKB1P19838 RN7SL270P-201ENST00000579643 281 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC6.81□□□□□ -1.32
NFKB1P19838 FAM106CP-201ENST00000582212 507 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC6.81□□□□□ -1.32
NFKB1P19838 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.81□□□□□ -1.32
NFKB1P19838 DYNLL1P1-201ENST00000595442 269 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 AL360085.1-201ENST00000604713 532 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 PTCHD3P1-201ENST00000612350 537 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 AL445647.2-201ENST00000615170 130 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.81□□□□□ -1.32
NFKB1P19838 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
NFKB1P19838 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NFKB1P19838 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NFKB1P19838 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NFKB1P19838 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.81□□□□□ -1.32
NFKB1P19838 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NFKB1P19838 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NFKB1P19838 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.81□□□□□ -1.32
NFKB1P19838 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.81□□□□□ -1.32
NFKB1P19838 OR5M2P-202ENST00000641241 4242 ntBASIC6.81□□□□□ -1.32
NFKB1P19838 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
NFKB1P19838 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NFKB1P19838 AL139384.2-201ENST00000613809 3590 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.8□□□□□ -1.32
NFKB1P19838 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NFKB1P19838 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms