Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC000367.1-201ENST00000452711 1766 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 AC020656.2-201ENST00000613291 5309 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.13□□□□□ -1.43
PTPN1P18031 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN1P18031 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN1P18031 AC087516.1-201ENST00000561236 2428 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN1P18031 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.13□□□□□ -1.43
PTPN1P18031 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PTPN1P18031 FAM3C2-201ENST00000312214 681 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 AL159987.1-201ENST00000347911 293 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN1P18031 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
PTPN1P18031 MIR323B-201ENST00000385269 82 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 AL590084.2-201ENST00000401481 382 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.13□□□□□ -1.43
PTPN1P18031 MOB4-205ENST00000409916 829 ntTSL 3 BASIC6.13□□□□□ -1.43
PTPN1P18031 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.13□□□□□ -1.43
PTPN1P18031 AC027644.1-201ENST00000419595 298 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 AC004074.1-201ENST00000421810 1063 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC6.13□□□□□ -1.43
PTPN1P18031 AL022331.1-201ENST00000429025 477 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.13□□□□□ -1.43
PTPN1P18031 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.13□□□□□ -1.43
PTPN1P18031 AL354941.1-201ENST00000438600 464 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 FRG2FP-204ENST00000453982 852 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 AL109741.2-201ENST00000455561 343 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 RPL35AP19-201ENST00000469425 329 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 NPM1P21-201ENST00000513394 762 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC6.13□□□□□ -1.43
PTPN1P18031 snoU109.5-201ENST00000516231 132 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.13□□□□□ -1.43
PTPN1P18031 RPL12P22-201ENST00000519073 490 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.13□□□□□ -1.43
PTPN1P18031 AC112191.2-201ENST00000522428 333 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 HMGB1P42-201ENST00000532126 553 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 AL121594.2-201ENST00000541658 472 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.13□□□□□ -1.43
PTPN1P18031 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.13□□□□□ -1.43
PTPN1P18031 DPPA2P4-201ENST00000563717 878 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 MIR5708-201ENST00000579723 85 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.13□□□□□ -1.43
PTPN1P18031 AP001981.2-201ENST00000603241 418 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 AC010738.1-201ENST00000604970 987 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 AC004492.1-201ENST00000607036 742 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 AC090246.1-201ENST00000616499 426 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC6.13□□□□□ -1.43
PTPN1P18031 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
PTPN1P18031 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.13□□□□□ -1.43
PTPN1P18031 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN1P18031 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
PTPN1P18031 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.13□□□□□ -1.43
PTPN1P18031 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.13□□□□□ -1.43
PTPN1P18031 AL592429.1-201ENST00000403909 1473 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN1P18031 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.13□□□□□ -1.43
PTPN1P18031 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN1P18031 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN1P18031 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN1P18031 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN1P18031 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PTPN1P18031 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN1P18031 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN1P18031 MFSD8-239ENST00000641590 2479 ntBASIC6.13□□□□□ -1.43
PTPN1P18031 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PTPN1P18031 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PTPN1P18031 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN1P18031 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN1P18031 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.12□□□□□ -1.43
PTPN1P18031 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.12□□□□□ -1.43
PTPN1P18031 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.12□□□□□ -1.43
PTPN1P18031 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN1P18031 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN1P18031 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN1P18031 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN1P18031 RNA5SP435-201ENST00000364044 108 ntBASIC6.12□□□□□ -1.43
PTPN1P18031 snoZ40.1-201ENST00000364540 72 ntBASIC6.12□□□□□ -1.43
PTPN1P18031 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
PTPN1P18031 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN1P18031 SNORA17A-201ENST00000391185 133 ntBASIC6.12□□□□□ -1.43
PTPN1P18031 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN1P18031 AC092642.1-201ENST00000392417 425 ntBASIC6.12□□□□□ -1.43
PTPN1P18031 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
PTPN1P18031 AL390237.1-201ENST00000404226 1415 ntBASIC6.12□□□□□ -1.43
PTPN1P18031 AL590806.1-201ENST00000415818 853 ntBASIC6.12□□□□□ -1.43
PTPN1P18031 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.12□□□□□ -1.43
PTPN1P18031 AC098592.1-201ENST00000419352 333 ntBASIC6.12□□□□□ -1.43
PTPN1P18031 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.12□□□□□ -1.43
PTPN1P18031 RPL34P3-201ENST00000421454 338 ntBASIC6.12□□□□□ -1.43
PTPN1P18031 MTND4P6-201ENST00000438297 472 ntBASIC6.12□□□□□ -1.43
PTPN1P18031 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC6.12□□□□□ -1.43
PTPN1P18031 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.12□□□□□ -1.43
PTPN1P18031 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.12□□□□□ -1.43
PTPN1P18031 RPS27AP2-201ENST00000457576 465 ntBASIC6.12□□□□□ -1.43
PTPN1P18031 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PTPN1P18031 AC011979.1-201ENST00000472300 483 ntBASIC6.12□□□□□ -1.43
PTPN1P18031 RN7SL273P-201ENST00000481561 299 ntBASIC6.12□□□□□ -1.43
PTPN1P18031 RN7SL570P-201ENST00000484405 292 ntBASIC6.12□□□□□ -1.43
PTPN1P18031 AC105420.1-201ENST00000504389 582 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms