Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
COL11A1P12107 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.19□□□□□ -1.58
COL11A1P12107 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.19□□□□□ -1.58
COL11A1P12107 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL11A1P12107 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.19□□□□□ -1.58
COL11A1P12107 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.19□□□□□ -1.58
COL11A1P12107 RPL7P19-201ENST00000469948 618 ntBASIC5.19□□□□□ -1.58
COL11A1P12107 AC041039.1-201ENST00000485656 536 ntBASIC5.19□□□□□ -1.58
COL11A1P12107 AC098799.3-201ENST00000506095 438 ntBASIC5.19□□□□□ -1.58
COL11A1P12107 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL11A1P12107 HMGB1P23-201ENST00000518743 568 ntBASIC5.19□□□□□ -1.58
COL11A1P12107 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.19□□□□□ -1.58
COL11A1P12107 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.19□□□□□ -1.58
COL11A1P12107 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.19□□□□□ -1.58
COL11A1P12107 BNIP3P5-201ENST00000562290 498 ntBASIC5.19□□□□□ -1.58
COL11A1P12107 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.19□□□□□ -1.58
COL11A1P12107 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.19□□□□□ -1.58
COL11A1P12107 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.19□□□□□ -1.58
COL11A1P12107 MIR6891-201ENST00000618788 93 ntBASIC5.19□□□□□ -1.58
COL11A1P12107 AL035461.2-201ENST00000619201 524 ntBASIC5.19□□□□□ -1.58
COL11A1P12107 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL11A1P12107 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL11A1P12107 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.19□□□□□ -1.58
COL11A1P12107 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
COL11A1P12107 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL11A1P12107 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
COL11A1P12107 AL731566.1-201ENST00000620490 1937 ntBASIC5.19□□□□□ -1.58
COL11A1P12107 AC025031.4-201ENST00000621248 3271 ntBASIC5.19□□□□□ -1.58
COL11A1P12107 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
COL11A1P12107 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.19□□□□□ -1.58
COL11A1P12107 SCARNA15-201ENST00000607520 4325 ntBASIC5.19□□□□□ -1.58
COL11A1P12107 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL11A1P12107 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL11A1P12107 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL11A1P12107 AC100778.3-201ENST00000580060 1750 ntBASIC5.18□□□□□ -1.58
COL11A1P12107 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL11A1P12107 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
COL11A1P12107 TMBIM7P-201ENST00000418074 855 ntBASIC5.18□□□□□ -1.58
COL11A1P12107 AL158073.1-201ENST00000426848 1104 ntBASIC5.18□□□□□ -1.58
COL11A1P12107 AL136231.1-201ENST00000429407 730 ntBASIC5.18□□□□□ -1.58
COL11A1P12107 OR4C10P-201ENST00000434991 931 ntBASIC5.18□□□□□ -1.58
COL11A1P12107 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.18□□□□□ -1.58
COL11A1P12107 AC105137.1-201ENST00000484355 562 ntBASIC5.18□□□□□ -1.58
COL11A1P12107 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.18□□□□□ -1.58
COL11A1P12107 NPM1P6-201ENST00000521088 871 ntBASIC5.18□□□□□ -1.58
COL11A1P12107 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.18□□□□□ -1.58
COL11A1P12107 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.18□□□□□ -1.58
COL11A1P12107 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.18□□□□□ -1.58
COL11A1P12107 AC130352.1-201ENST00000602979 661 ntBASIC5.18□□□□□ -1.58
COL11A1P12107 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL11A1P12107 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL11A1P12107 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL11A1P12107 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL11A1P12107 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL11A1P12107 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.18□□□□□ -1.58
COL11A1P12107 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.18□□□□□ -1.58
COL11A1P12107 RNU1-63P-201ENST00000383902 164 ntBASIC5.18□□□□□ -1.58
COL11A1P12107 GAPDHP49-201ENST00000421421 961 ntBASIC5.18□□□□□ -1.58
COL11A1P12107 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.18□□□□□ -1.58
COL11A1P12107 RPL21P91-201ENST00000429231 479 ntBASIC5.18□□□□□ -1.58
COL11A1P12107 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.18□□□□□ -1.58
COL11A1P12107 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.18□□□□□ -1.58
COL11A1P12107 AC073073.1-201ENST00000493920 463 ntBASIC5.18□□□□□ -1.58
COL11A1P12107 ARF4P1-201ENST00000605447 541 ntBASIC5.18□□□□□ -1.58
COL11A1P12107 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.18□□□□□ -1.58
COL11A1P12107 AC107068.1-201ENST00000563286 4218 ntBASIC5.18□□□□□ -1.58
COL11A1P12107 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.18□□□□□ -1.58
COL11A1P12107 AC100871.1-201ENST00000507871 1456 ntBASIC5.18□□□□□ -1.58
COL11A1P12107 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.17□□□□□ -1.58
COL11A1P12107 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.17□□□□□ -1.58
COL11A1P12107 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
COL11A1P12107 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL11A1P12107 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL11A1P12107 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL11A1P12107 RNA5SP366-201ENST00000365454 123 ntBASIC5.17□□□□□ -1.58
COL11A1P12107 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.17□□□□□ -1.58
COL11A1P12107 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.17□□□□□ -1.58
COL11A1P12107 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.17□□□□□ -1.58
COL11A1P12107 MTCO1P35-201ENST00000515270 228 ntBASIC5.17□□□□□ -1.58
COL11A1P12107 OR8A2P-201ENST00000528631 952 ntBASIC5.17□□□□□ -1.58
COL11A1P12107 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.17□□□□□ -1.58
COL11A1P12107 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
COL11A1P12107 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
COL11A1P12107 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL11A1P12107 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL11A1P12107 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.17□□□□□ -1.58
COL11A1P12107 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL11A1P12107 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL11A1P12107 AL161912.2-201ENST00000565707 3007 ntBASIC5.17□□□□□ -1.58
COL11A1P12107 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.17□□□□□ -1.58
COL11A1P12107 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL11A1P12107 MAPK10-328ENST00000641553 4009 ntBASIC5.17□□□□□ -1.58
COL11A1P12107 OR51H2P-202ENST00000641424 3046 ntBASIC5.16□□□□□ -1.58
COL11A1P12107 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL11A1P12107 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
COL11A1P12107 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL11A1P12107 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.16□□□□□ -1.58
COL11A1P12107 MFSD8-220ENST00000641243 1422 ntBASIC5.16□□□□□ -1.58
COL11A1P12107 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL11A1P12107 AC097374.1-203ENST00000400783 485 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms