Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.46□□□□□ -1.38
SNRPA1P09661 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.46□□□□□ -1.38
SNRPA1P09661 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC6.46□□□□□ -1.38
SNRPA1P09661 RNA5SP116-201ENST00000516132 98 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 AC092709.1-201ENST00000521355 1045 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.46□□□□□ -1.38
SNRPA1P09661 AP001636.2-201ENST00000525517 696 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.46□□□□□ -1.38
SNRPA1P09661 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SNRPA1P09661 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.46□□□□□ -1.38
SNRPA1P09661 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.46□□□□□ -1.38
SNRPA1P09661 AC092868.3-201ENST00000560515 784 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 MIR4270-201ENST00000581799 70 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.46□□□□□ -1.38
SNRPA1P09661 VN1R87P-201ENST00000596706 487 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 AC112503.1-201ENST00000608436 391 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 OR51C1P-201ENST00000608504 942 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 AL161616.1-201ENST00000611867 286 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 AL162574.1-201ENST00000615702 950 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.46□□□□□ -1.38
SNRPA1P09661 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.46□□□□□ -1.38
SNRPA1P09661 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.38
SNRPA1P09661 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.38
SNRPA1P09661 NLRP3P1-201ENST00000622303 1785 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SNRPA1P09661 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SNRPA1P09661 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SNRPA1P09661 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SNRPA1P09661 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.45□□□□□ -1.38
SNRPA1P09661 AL355834.1-201ENST00000556602 3965 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.45□□□□□ -1.38
SNRPA1P09661 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SNRPA1P09661 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.45□□□□□ -1.38
SNRPA1P09661 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SNRPA1P09661 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SNRPA1P09661 RNA5SP241-201ENST00000391326 114 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 AC009506.2-201ENST00000420635 840 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 ARL2BPP3-201ENST00000421226 480 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 AC245028.1-201ENST00000423259 256 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 BX276092.6-201ENST00000430476 250 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 ARL5AP3-201ENST00000439327 386 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 BX276092.8-201ENST00000455722 250 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC6.45□□□□□ -1.38
SNRPA1P09661 GYG1P1-201ENST00000460864 698 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 AC005412.2-201ENST00000492004 341 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC6.45□□□□□ -1.38
SNRPA1P09661 PRELID3BP5-201ENST00000508612 460 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.45□□□□□ -1.38
SNRPA1P09661 MORF4L1P3-201ENST00000525966 950 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.45□□□□□ -1.38
SNRPA1P09661 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.45□□□□□ -1.38
SNRPA1P09661 MIR3667-201ENST00000581025 74 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 EIF1P5-201ENST00000585002 234 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 AC005377.1-201ENST00000605126 456 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 MIR1264-201ENST00000616374 69 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.45□□□□□ -1.38
SNRPA1P09661 AL590396.4-201ENST00000636779 956 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SNRPA1P09661 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.45□□□□□ -1.38
SNRPA1P09661 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 MSL3P1-202ENST00000440028 1468 ntBASIC6.45□□□□□ -1.38
SNRPA1P09661 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.45□□□□□ -1.38
SNRPA1P09661 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.45□□□□□ -1.38
SNRPA1P09661 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.45□□□□□ -1.38
SNRPA1P09661 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SNRPA1P09661 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SNRPA1P09661 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.44□□□□□ -1.38
SNRPA1P09661 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SNRPA1P09661 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SNRPA1P09661 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SNRPA1P09661 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SNRPA1P09661 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SNRPA1P09661 MAPK10-338ENST00000641647 3362 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SNRPA1P09661 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SNRPA1P09661 RNA5SP113-201ENST00000410486 84 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 FAR2P2-201ENST00000413041 594 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 TRIM60P17-201ENST00000415181 719 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.44□□□□□ -1.38
SNRPA1P09661 MTND2P16-201ENST00000419987 799 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 SETP9-201ENST00000423837 832 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 FAR2P4-202ENST00000425399 584 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 AC093414.1-201ENST00000434712 514 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 RPL5P25-201ENST00000441148 775 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.44□□□□□ -1.38
SNRPA1P09661 AC011753.3-201ENST00000443436 406 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 RPL31P20-201ENST00000449593 360 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 RBMY2TP-201ENST00000451162 947 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 CBX1P2-201ENST00000453841 458 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.44□□□□□ -1.38
SNRPA1P09661 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.44□□□□□ -1.38
SNRPA1P09661 MTCO2P6-201ENST00000463134 685 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 RN7SL738P-201ENST00000470264 297 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 AC093720.1-201ENST00000505681 714 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.44□□□□□ -1.38
SNRPA1P09661 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC6.44□□□□□ -1.38
SNRPA1P09661 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.44□□□□□ -1.38
SNRPA1P09661 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.44□□□□□ -1.38
SNRPA1P09661 NPM1P21-201ENST00000513394 762 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 RN7SKP287-201ENST00000516546 266 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms