Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TPM1P09493 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.24□□□□□ -1.57
TPM1P09493 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
TPM1P09493 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.23□□□□□ -1.57
TPM1P09493 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TPM1P09493 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TPM1P09493 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TPM1P09493 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TPM1P09493 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.23□□□□□ -1.57
TPM1P09493 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TPM1P09493 AC107977.1-201ENST00000355745 939 ntBASIC5.23□□□□□ -1.57
TPM1P09493 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.23□□□□□ -1.57
TPM1P09493 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TPM1P09493 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TPM1P09493 ATP5F1P2-201ENST00000398143 760 ntBASIC5.23□□□□□ -1.57
TPM1P09493 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TPM1P09493 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.23□□□□□ -1.57
TPM1P09493 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.23□□□□□ -1.57
TPM1P09493 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.23□□□□□ -1.57
TPM1P09493 ATG4AP1-201ENST00000416893 538 ntBASIC5.23□□□□□ -1.57
TPM1P09493 AL513325.1-201ENST00000417716 1034 ntBASIC5.23□□□□□ -1.57
TPM1P09493 AF186996.5-201ENST00000418098 904 ntBASIC5.23□□□□□ -1.57
TPM1P09493 OR2AM1P-201ENST00000422137 422 ntBASIC5.23□□□□□ -1.57
TPM1P09493 AL138899.2-201ENST00000439139 499 ntBASIC5.23□□□□□ -1.57
TPM1P09493 AC092647.2-201ENST00000452998 253 ntBASIC5.23□□□□□ -1.57
TPM1P09493 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.23□□□□□ -1.57
TPM1P09493 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.23□□□□□ -1.57
TPM1P09493 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.23□□□□□ -1.57
TPM1P09493 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.23□□□□□ -1.57
TPM1P09493 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.23□□□□□ -1.57
TPM1P09493 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.23□□□□□ -1.57
TPM1P09493 FKBP1AP1-201ENST00000594588 318 ntBASIC5.23□□□□□ -1.57
TPM1P09493 AC005520.3-201ENST00000602874 370 ntBASIC5.23□□□□□ -1.57
TPM1P09493 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.23□□□□□ -1.57
TPM1P09493 AC126915.2-201ENST00000610957 190 ntBASIC5.23□□□□□ -1.57
TPM1P09493 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.23□□□□□ -1.57
TPM1P09493 MTND4P26-201ENST00000415971 1359 ntBASIC5.23□□□□□ -1.57
TPM1P09493 KPNA2P2-201ENST00000419546 1489 ntBASIC5.23□□□□□ -1.57
TPM1P09493 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
TPM1P09493 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TPM1P09493 AL133243.3-201ENST00000617415 3004 ntBASIC5.23□□□□□ -1.57
TPM1P09493 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TPM1P09493 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TPM1P09493 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.22□□□□□ -1.57
TPM1P09493 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.22□□□□□ -1.57
TPM1P09493 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TPM1P09493 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.22□□□□□ -1.57
TPM1P09493 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TPM1P09493 MIR448-201ENST00000362131 111 ntBASIC5.22□□□□□ -1.57
TPM1P09493 RNA5SP132-201ENST00000364725 118 ntBASIC5.22□□□□□ -1.57
TPM1P09493 AC104297.1-201ENST00000393779 870 ntBASIC5.22□□□□□ -1.57
TPM1P09493 RPL5P19-201ENST00000404228 893 ntBASIC5.22□□□□□ -1.57
TPM1P09493 RNA5SP345-201ENST00000410646 108 ntBASIC5.22□□□□□ -1.57
TPM1P09493 RPL24P2-201ENST00000421023 475 ntBASIC5.22□□□□□ -1.57
TPM1P09493 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.22□□□□□ -1.57
TPM1P09493 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.22□□□□□ -1.57
TPM1P09493 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.22□□□□□ -1.57
TPM1P09493 MTATP6P1-201ENST00000514057 681 ntBASIC5.22□□□□□ -1.57
TPM1P09493 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.22□□□□□ -1.57
TPM1P09493 MTND6P33-201ENST00000571794 183 ntBASIC5.22□□□□□ -1.57
TPM1P09493 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.22□□□□□ -1.57
TPM1P09493 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.22□□□□□ -1.57
TPM1P09493 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.22□□□□□ -1.57
TPM1P09493 HMGB2P1-201ENST00000591146 634 ntBASIC5.22□□□□□ -1.57
TPM1P09493 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.22□□□□□ -1.57
TPM1P09493 AL669942.2-201ENST00000620352 697 ntBASIC5.22□□□□□ -1.57
TPM1P09493 MIR7154-201ENST00000620673 73 ntBASIC5.22□□□□□ -1.57
TPM1P09493 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TPM1P09493 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.22□□□□□ -1.57
TPM1P09493 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TPM1P09493 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TPM1P09493 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
TPM1P09493 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.21□□□□□ -1.57
TPM1P09493 ZNF733P-202ENST00000444809 1573 ntBASIC5.21□□□□□ -1.57
TPM1P09493 SMG1P6-201ENST00000532337 2930 ntBASIC5.21□□□□□ -1.57
TPM1P09493 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.21□□□□□ -1.57
TPM1P09493 THAP12P4-201ENST00000528321 2266 ntBASIC5.21□□□□□ -1.58
TPM1P09493 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.21□□□□□ -1.58
TPM1P09493 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TPM1P09493 U3.2-201ENST00000362981 210 ntBASIC5.21□□□□□ -1.58
TPM1P09493 SNORA17A-201ENST00000391185 133 ntBASIC5.21□□□□□ -1.58
TPM1P09493 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.21□□□□□ -1.58
TPM1P09493 RPL35AP24-201ENST00000413846 330 ntBASIC5.21□□□□□ -1.58
TPM1P09493 VN1R31P-201ENST00000417498 730 ntBASIC5.21□□□□□ -1.58
TPM1P09493 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.21□□□□□ -1.58
TPM1P09493 AC069285.2-201ENST00000440210 275 ntBASIC5.21□□□□□ -1.58
TPM1P09493 AC011753.3-201ENST00000443436 406 ntBASIC5.21□□□□□ -1.58
TPM1P09493 MTND6P32-201ENST00000457611 483 ntBASIC5.21□□□□□ -1.58
TPM1P09493 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.21□□□□□ -1.58
TPM1P09493 RPS4XP1-201ENST00000482189 787 ntBASIC5.21□□□□□ -1.58
TPM1P09493 AC008410.1-201ENST00000483777 339 ntBASIC5.21□□□□□ -1.58
TPM1P09493 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TPM1P09493 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.21□□□□□ -1.58
TPM1P09493 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.21□□□□□ -1.58
TPM1P09493 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.21□□□□□ -1.58
TPM1P09493 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.21□□□□□ -1.58
TPM1P09493 AL135786.2-201ENST00000608422 615 ntBASIC5.21□□□□□ -1.58
TPM1P09493 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.21□□□□□ -1.58
TPM1P09493 AL359757.1-201ENST00000623176 255 ntBASIC5.21□□□□□ -1.58
TPM1P09493 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms