Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC010132.2-201ENST00000295493 1043 ntBASIC4.7□□□□□ -1.66
HOXC4P09017 UBBP2-201ENST00000376781 231 ntBASIC4.7□□□□□ -1.66
HOXC4P09017 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC4P09017 AL049697.2-201ENST00000403708 294 ntBASIC4.7□□□□□ -1.66
HOXC4P09017 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HOXC4P09017 RN7SKP216-201ENST00000411050 312 ntBASIC4.7□□□□□ -1.66
HOXC4P09017 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC4P09017 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC4P09017 BTG3P1-201ENST00000435859 716 ntBASIC4.7□□□□□ -1.66
HOXC4P09017 VN1R96P-201ENST00000446052 858 ntBASIC4.7□□□□□ -1.66
HOXC4P09017 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC4P09017 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC4P09017 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC4P09017 AC091544.1-201ENST00000484702 348 ntBASIC4.7□□□□□ -1.66
HOXC4P09017 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC4P09017 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.7□□□□□ -1.66
HOXC4P09017 AC091868.1-201ENST00000508746 304 ntBASIC4.7□□□□□ -1.66
HOXC4P09017 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC4P09017 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC4P09017 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC4P09017 OR5AN2P-201ENST00000534535 896 ntBASIC4.7□□□□□ -1.66
HOXC4P09017 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC4P09017 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
HOXC4P09017 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC4P09017 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.7□□□□□ -1.66
HOXC4P09017 AC012414.7-202ENST00000622705 1090 ntBASIC4.7□□□□□ -1.66
HOXC4P09017 AP000346.3-201ENST00000622821 210 ntBASIC4.7□□□□□ -1.66
HOXC4P09017 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC4P09017 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC4P09017 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HOXC4P09017 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HOXC4P09017 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC4P09017 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC4P09017 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
HOXC4P09017 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC4P09017 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC4P09017 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HOXC4P09017 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC4P09017 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC4P09017 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
HOXC4P09017 DHX9P1-201ENST00000436565 3076 ntBASIC4.69□□□□□ -1.66
HOXC4P09017 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC4P09017 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC4P09017 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HOXC4P09017 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC4P09017 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC4P09017 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC4P09017 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC4P09017 SNORD113.2-201ENST00000364166 89 ntBASIC4.69□□□□□ -1.66
HOXC4P09017 BMS1P3-201ENST00000372011 932 ntBASIC4.69□□□□□ -1.66
HOXC4P09017 RNA5SP397-201ENST00000391323 118 ntBASIC4.69□□□□□ -1.66
HOXC4P09017 Y_RNA.625-201ENST00000411256 107 ntBASIC4.69□□□□□ -1.66
HOXC4P09017 FAR2P2-201ENST00000413041 594 ntBASIC4.69□□□□□ -1.66
HOXC4P09017 AL591848.1-201ENST00000413092 322 ntBASIC4.69□□□□□ -1.66
HOXC4P09017 FABP7P1-201ENST00000424004 391 ntBASIC4.69□□□□□ -1.66
HOXC4P09017 FAR2P4-202ENST00000425399 584 ntBASIC4.69□□□□□ -1.66
HOXC4P09017 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC4P09017 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC4P09017 H2AFZP5-201ENST00000446960 382 ntBASIC4.69□□□□□ -1.66
HOXC4P09017 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.69□□□□□ -1.66
HOXC4P09017 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC4P09017 AC245028.2-201ENST00000458673 253 ntBASIC4.69□□□□□ -1.66
HOXC4P09017 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXC4P09017 AC096741.1-201ENST00000472250 846 ntBASIC4.69□□□□□ -1.66
HOXC4P09017 AC008897.1-201ENST00000494006 347 ntBASIC4.69□□□□□ -1.66
HOXC4P09017 AC098799.1-201ENST00000504752 800 ntBASIC4.69□□□□□ -1.66
HOXC4P09017 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC4P09017 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC4P09017 RNU6-943P-201ENST00000516960 98 ntBASIC4.69□□□□□ -1.66
HOXC4P09017 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC4P09017 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
HOXC4P09017 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.69□□□□□ -1.66
HOXC4P09017 AC008126.1-201ENST00000549019 480 ntBASIC4.69□□□□□ -1.66
HOXC4P09017 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC4P09017 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC4P09017 RN7SL652P-201ENST00000577769 300 ntBASIC4.69□□□□□ -1.66
HOXC4P09017 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC4P09017 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC4P09017 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC4P09017 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC4P09017 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC4P09017 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HOXC4P09017 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC4P09017 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC4P09017 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC4P09017 DDX18P5-201ENST00000534547 1306 ntBASIC4.69□□□□□ -1.66
HOXC4P09017 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXC4P09017 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC4P09017 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC4P09017 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC4P09017 MAPK10-349ENST00000641767 3661 ntBASIC4.68□□□□□ -1.66
HOXC4P09017 AL121950.1-201ENST00000624993 2077 ntBASIC4.68□□□□□ -1.66
HOXC4P09017 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC4P09017 AL590240.1-201ENST00000334118 313 ntBASIC4.68□□□□□ -1.66
HOXC4P09017 RNA5SP505-201ENST00000364748 108 ntBASIC4.68□□□□□ -1.66
HOXC4P09017 AL590762.2-201ENST00000395798 571 ntBASIC4.68□□□□□ -1.66
HOXC4P09017 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXC4P09017 AL356968.2-201ENST00000412769 1257 ntBASIC4.68□□□□□ -1.66
HOXC4P09017 ATG4AP1-201ENST00000416893 538 ntBASIC4.68□□□□□ -1.66
HOXC4P09017 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms