Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 MTATP6P9-201ENST00000515039 680 ntBASIC5.55□□□□□ -1.52
MMP3P08254 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.55□□□□□ -1.52
MMP3P08254 AP001880.2-201ENST00000538233 448 ntBASIC5.55□□□□□ -1.52
MMP3P08254 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.55□□□□□ -1.52
MMP3P08254 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.55□□□□□ -1.52
MMP3P08254 AC034229.4-201ENST00000607861 441 ntBASIC5.55□□□□□ -1.52
MMP3P08254 AL162574.1-201ENST00000615702 950 ntBASIC5.55□□□□□ -1.52
MMP3P08254 AC108359.1-201ENST00000616451 1211 ntBASIC5.55□□□□□ -1.52
MMP3P08254 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.55□□□□□ -1.52
MMP3P08254 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
MMP3P08254 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
MMP3P08254 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.55□□□□□ -1.52
MMP3P08254 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.55□□□□□ -1.52
MMP3P08254 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.55□□□□□ -1.52
MMP3P08254 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
MMP3P08254 AC020633.1-201ENST00000468439 2247 ntBASIC5.55□□□□□ -1.52
MMP3P08254 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
MMP3P08254 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.55□□□□□ -1.52
MMP3P08254 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.55□□□□□ -1.52
MMP3P08254 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
MMP3P08254 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
MMP3P08254 HSPA8P19-201ENST00000505359 1517 ntBASIC5.54□□□□□ -1.52
MMP3P08254 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.54□□□□□ -1.52
MMP3P08254 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
MMP3P08254 AP002512.4-202ENST00000641599 4530 ntBASIC5.54□□□□□ -1.52
MMP3P08254 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
MMP3P08254 AL035079.1-201ENST00000405210 287 ntBASIC5.54□□□□□ -1.52
MMP3P08254 VN1R37P-201ENST00000419096 748 ntBASIC5.54□□□□□ -1.52
MMP3P08254 MORF4L1P7-201ENST00000426038 703 ntBASIC5.54□□□□□ -1.52
MMP3P08254 UBE2D3P3-201ENST00000426992 425 ntBASIC5.54□□□□□ -1.52
MMP3P08254 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.54□□□□□ -1.52
MMP3P08254 COX6CP13-201ENST00000428703 226 ntBASIC5.54□□□□□ -1.52
MMP3P08254 MRPL50P1-201ENST00000431951 384 ntBASIC5.54□□□□□ -1.52
MMP3P08254 AC091390.1-201ENST00000433904 331 ntBASIC5.54□□□□□ -1.52
MMP3P08254 AL513321.1-201ENST00000441175 761 ntBASIC5.54□□□□□ -1.52
MMP3P08254 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.54□□□□□ -1.52
MMP3P08254 AC010733.1-201ENST00000451515 401 ntBASIC5.54□□□□□ -1.52
MMP3P08254 HMGB1P4-201ENST00000455362 567 ntBASIC5.54□□□□□ -1.52
MMP3P08254 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.54□□□□□ -1.52
MMP3P08254 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.54□□□□□ -1.52
MMP3P08254 RPL23AP56-201ENST00000460778 453 ntBASIC5.54□□□□□ -1.52
MMP3P08254 RN7SL441P-201ENST00000492388 296 ntBASIC5.54□□□□□ -1.52
MMP3P08254 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.54□□□□□ -1.52
MMP3P08254 MTCO2P9-201ENST00000503214 694 ntBASIC5.54□□□□□ -1.52
MMP3P08254 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.54□□□□□ -1.52
MMP3P08254 AC112198.4-201ENST00000515450 351 ntBASIC5.54□□□□□ -1.52
MMP3P08254 RNA5SP392-201ENST00000516905 112 ntBASIC5.54□□□□□ -1.52
MMP3P08254 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
MMP3P08254 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.54□□□□□ -1.52
MMP3P08254 AL512310.9-201ENST00000553311 948 ntBASIC5.54□□□□□ -1.52
MMP3P08254 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.54□□□□□ -1.52
MMP3P08254 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.54□□□□□ -1.52
MMP3P08254 MIR4760-201ENST00000585040 80 ntBASIC5.54□□□□□ -1.52
MMP3P08254 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.54□□□□□ -1.52
MMP3P08254 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.54□□□□□ -1.52
MMP3P08254 AC012213.4-201ENST00000606457 354 ntBASIC5.54□□□□□ -1.52
MMP3P08254 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
MMP3P08254 AC022960.3-201ENST00000619794 441 ntBASIC5.54□□□□□ -1.52
MMP3P08254 AC095038.2-201ENST00000621464 1070 ntBASIC5.54□□□□□ -1.52
MMP3P08254 AC097460.3-201ENST00000623099 442 ntBASIC5.54□□□□□ -1.52
MMP3P08254 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
MMP3P08254 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.54□□□□□ -1.52
MMP3P08254 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
MMP3P08254 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
MMP3P08254 AC073869.10-201ENST00000642016 354 ntBASIC5.54□□□□□ -1.52
MMP3P08254 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
MMP3P08254 AC092070.2-203ENST00000598377 3644 ntBASIC5.54□□□□□ -1.52
MMP3P08254 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
MMP3P08254 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
MMP3P08254 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
MMP3P08254 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
MMP3P08254 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.54□□□□□ -1.52
MMP3P08254 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
MMP3P08254 ECM1P2-201ENST00000503354 1577 ntBASIC5.54□□□□□ -1.52
MMP3P08254 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.54□□□□□ -1.52
MMP3P08254 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
MMP3P08254 AC005261.6-201ENST00000623072 1387 ntBASIC5.54□□□□□ -1.52
MMP3P08254 OR10AB1P-202ENST00000641219 1686 ntBASIC5.53□□□□□ -1.52
MMP3P08254 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
MMP3P08254 ZNF652P1-201ENST00000442420 1309 ntBASIC5.53□□□□□ -1.52
MMP3P08254 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
MMP3P08254 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
MMP3P08254 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.53□□□□□ -1.52
MMP3P08254 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MMP3P08254 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
MMP3P08254 OR9K1P-202ENST00000641111 3217 ntBASIC5.53□□□□□ -1.52
MMP3P08254 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
MMP3P08254 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
MMP3P08254 RNU6-650P-201ENST00000365658 111 ntBASIC5.53□□□□□ -1.52
MMP3P08254 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MMP3P08254 GLULP6-201ENST00000399502 913 ntBASIC5.53□□□□□ -1.52
MMP3P08254 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.53□□□□□ -1.52
MMP3P08254 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MMP3P08254 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.53□□□□□ -1.52
MMP3P08254 C4BPAP2-201ENST00000428434 478 ntBASIC5.53□□□□□ -1.52
MMP3P08254 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.53□□□□□ -1.52
MMP3P08254 BX276092.6-201ENST00000430476 250 ntBASIC5.53□□□□□ -1.52
MMP3P08254 ZNF965P-201ENST00000432501 817 ntBASIC5.53□□□□□ -1.52
MMP3P08254 AL359265.2-201ENST00000434367 631 ntBASIC5.53□□□□□ -1.52
MMP3P08254 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms