Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC096577.2-201ENST00000611455 153 ntBASIC4.36□□□□□ -1.71
SPTA1P02549 AC015722.2-201ENST00000622210 551 ntBASIC4.36□□□□□ -1.71
SPTA1P02549 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SPTA1P02549 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.36□□□□□ -1.71
SPTA1P02549 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.36□□□□□ -1.71
SPTA1P02549 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
SPTA1P02549 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SPTA1P02549 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
SPTA1P02549 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.36□□□□□ -1.71
SPTA1P02549 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SPTA1P02549 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC4.36□□□□□ -1.71
SPTA1P02549 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SPTA1P02549 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SPTA1P02549 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SPTA1P02549 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SPTA1P02549 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SPTA1P02549 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SPTA1P02549 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.35□□□□□ -1.71
SPTA1P02549 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.35□□□□□ -1.71
SPTA1P02549 snoU13.29-201ENST00000459370 104 ntBASIC4.35□□□□□ -1.71
SPTA1P02549 UQCRHP4-201ENST00000471686 272 ntBASIC4.35□□□□□ -1.71
SPTA1P02549 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.35□□□□□ -1.71
SPTA1P02549 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.35□□□□□ -1.71
SPTA1P02549 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.35□□□□□ -1.71
SPTA1P02549 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC4.35□□□□□ -1.71
SPTA1P02549 SNORA31.9-201ENST00000516429 84 ntBASIC4.35□□□□□ -1.71
SPTA1P02549 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SPTA1P02549 OR8R1P-201ENST00000543943 764 ntBASIC4.35□□□□□ -1.71
SPTA1P02549 AC084824.2-201ENST00000548906 345 ntBASIC4.35□□□□□ -1.71
SPTA1P02549 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.35□□□□□ -1.71
SPTA1P02549 AC084783.1-201ENST00000565846 910 ntBASIC4.35□□□□□ -1.71
SPTA1P02549 AL139124.1-201ENST00000609123 421 ntBASIC4.35□□□□□ -1.71
SPTA1P02549 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SPTA1P02549 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SPTA1P02549 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SPTA1P02549 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SPTA1P02549 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC4.35□□□□□ -1.71
SPTA1P02549 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SPTA1P02549 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
SPTA1P02549 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.35□□□□□ -1.71
SPTA1P02549 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC4.35□□□□□ -1.71
SPTA1P02549 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SPTA1P02549 PPIAP31-201ENST00000405422 495 ntBASIC4.35□□□□□ -1.71
SPTA1P02549 OR13Z1P-201ENST00000416141 834 ntBASIC4.35□□□□□ -1.71
SPTA1P02549 RPL19P16-201ENST00000433839 588 ntBASIC4.35□□□□□ -1.71
SPTA1P02549 RPS3AP54-201ENST00000435535 734 ntBASIC4.35□□□□□ -1.71
SPTA1P02549 YWHAZP2-201ENST00000440317 728 ntBASIC4.35□□□□□ -1.71
SPTA1P02549 RPL7P41-201ENST00000485823 957 ntBASIC4.35□□□□□ -1.71
SPTA1P02549 AC022133.1-201ENST00000490961 571 ntBASIC4.35□□□□□ -1.71
SPTA1P02549 AC097173.1-201ENST00000505862 819 ntBASIC4.35□□□□□ -1.71
SPTA1P02549 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.35□□□□□ -1.71
SPTA1P02549 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.35□□□□□ -1.71
SPTA1P02549 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.35□□□□□ -1.71
SPTA1P02549 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.35□□□□□ -1.71
SPTA1P02549 ARF4P1-201ENST00000605447 541 ntBASIC4.35□□□□□ -1.71
SPTA1P02549 MIR6867-201ENST00000610636 67 ntBASIC4.35□□□□□ -1.71
SPTA1P02549 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.35□□□□□ -1.71
SPTA1P02549 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SPTA1P02549 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.35□□□□□ -1.71
SPTA1P02549 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SPTA1P02549 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.35□□□□□ -1.71
SPTA1P02549 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC4.34□□□□□ -1.71
SPTA1P02549 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SPTA1P02549 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SPTA1P02549 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
SPTA1P02549 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SPTA1P02549 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SPTA1P02549 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SPTA1P02549 Y_RNA.111-201ENST00000363248 100 ntBASIC4.34□□□□□ -1.71
SPTA1P02549 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
SPTA1P02549 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SPTA1P02549 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.34□□□□□ -1.71
SPTA1P02549 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.34□□□□□ -1.71
SPTA1P02549 AL133338.2-201ENST00000604292 736 ntBASIC4.34□□□□□ -1.71
SPTA1P02549 AC011626.1-201ENST00000604710 562 ntBASIC4.34□□□□□ -1.71
SPTA1P02549 AC090948.2-201ENST00000607363 564 ntBASIC4.34□□□□□ -1.71
SPTA1P02549 AC007497.1-201ENST00000610421 561 ntBASIC4.34□□□□□ -1.71
SPTA1P02549 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SPTA1P02549 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SPTA1P02549 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SPTA1P02549 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SPTA1P02549 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SPTA1P02549 CASC19-243ENST00000641588 1546 ntBASIC4.34□□□□□ -1.71
SPTA1P02549 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SPTA1P02549 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SPTA1P02549 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.34□□□□□ -1.72
SPTA1P02549 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
SPTA1P02549 AL603766.1-201ENST00000407763 664 ntBASIC4.34□□□□□ -1.72
SPTA1P02549 NPM1P36-201ENST00000415681 835 ntBASIC4.34□□□□□ -1.72
SPTA1P02549 AL356095.1-201ENST00000417217 199 ntBASIC4.34□□□□□ -1.72
SPTA1P02549 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.34□□□□□ -1.72
SPTA1P02549 FABP7P1-201ENST00000424004 391 ntBASIC4.34□□□□□ -1.72
SPTA1P02549 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.34□□□□□ -1.72
SPTA1P02549 AC090018.1-201ENST00000434369 367 ntBASIC4.34□□□□□ -1.72
SPTA1P02549 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.34□□□□□ -1.72
SPTA1P02549 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SPTA1P02549 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.34□□□□□ -1.72
SPTA1P02549 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.34□□□□□ -1.72
SPTA1P02549 SCARNA10-201ENST00000459255 330 ntBASIC4.34□□□□□ -1.72
SPTA1P02549 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms