Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.6□□□□□ -1.67
TNFP01375 FKBP1BP1-201ENST00000553366 325 ntBASIC4.6□□□□□ -1.67
TNFP01375 AL359219.2-201ENST00000555184 348 ntBASIC4.6□□□□□ -1.67
TNFP01375 MIR4660-201ENST00000583549 74 ntBASIC4.6□□□□□ -1.67
TNFP01375 OR8G7P-201ENST00000616658 848 ntBASIC4.6□□□□□ -1.67
TNFP01375 MIR6810-201ENST00000622701 70 ntBASIC4.6□□□□□ -1.67
TNFP01375 AL049536.1-201ENST00000625043 744 ntBASIC4.6□□□□□ -1.67
TNFP01375 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TNFP01375 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TNFP01375 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.6□□□□□ -1.67
TNFP01375 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TNFP01375 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TNFP01375 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TNFP01375 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.6□□□□□ -1.67
TNFP01375 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.6□□□□□ -1.67
TNFP01375 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TNFP01375 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.6□□□□□ -1.67
TNFP01375 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
TNFP01375 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TNFP01375 OR56B2P-202ENST00000641377 2453 ntBASIC4.6□□□□□ -1.67
TNFP01375 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TNFP01375 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TNFP01375 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
TNFP01375 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.59□□□□□ -1.67
TNFP01375 SNORA62-201ENST00000365493 153 ntBASIC4.59□□□□□ -1.67
TNFP01375 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TNFP01375 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TNFP01375 AL034370.1-201ENST00000397254 1590 ntBASIC4.59□□□□□ -1.67
TNFP01375 AC012078.1-201ENST00000405035 1646 ntBASIC4.59□□□□□ -1.67
TNFP01375 AL358178.1-201ENST00000407698 397 ntBASIC4.59□□□□□ -1.67
TNFP01375 RAB28P1-201ENST00000411517 641 ntBASIC4.59□□□□□ -1.67
TNFP01375 E2F6P2-201ENST00000420708 748 ntBASIC4.59□□□□□ -1.67
TNFP01375 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.59□□□□□ -1.67
TNFP01375 RPL12P18-201ENST00000437175 325 ntBASIC4.59□□□□□ -1.67
TNFP01375 AC004938.1-201ENST00000438468 308 ntBASIC4.59□□□□□ -1.67
TNFP01375 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.59□□□□□ -1.67
TNFP01375 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.59□□□□□ -1.67
TNFP01375 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.59□□□□□ -1.67
TNFP01375 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.59□□□□□ -1.67
TNFP01375 RNA5SP249-201ENST00000516127 99 ntBASIC4.59□□□□□ -1.67
TNFP01375 AC034205.1-201ENST00000520621 638 ntBASIC4.59□□□□□ -1.67
TNFP01375 AC009643.1-201ENST00000532030 391 ntBASIC4.59□□□□□ -1.67
TNFP01375 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.59□□□□□ -1.67
TNFP01375 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.59□□□□□ -1.67
TNFP01375 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.59□□□□□ -1.67
TNFP01375 AC003985.2-201ENST00000562268 1669 ntBASIC4.59□□□□□ -1.67
TNFP01375 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.59□□□□□ -1.67
TNFP01375 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.59□□□□□ -1.67
TNFP01375 Z95327.3-201ENST00000610385 572 ntBASIC4.59□□□□□ -1.67
TNFP01375 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.59□□□□□ -1.67
TNFP01375 AC092376.2-201ENST00000622621 4116 ntBASIC4.59□□□□□ -1.67
TNFP01375 AC120338.1-201ENST00000625074 1541 ntBASIC4.59□□□□□ -1.67
TNFP01375 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.59□□□□□ -1.67
TNFP01375 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.59□□□□□ -1.67
TNFP01375 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TNFP01375 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TNFP01375 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.59□□□□□ -1.67
TNFP01375 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
TNFP01375 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
TNFP01375 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TNFP01375 AC020633.1-201ENST00000468439 2247 ntBASIC4.58□□□□□ -1.68
TNFP01375 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.58□□□□□ -1.68
TNFP01375 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
TNFP01375 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TNFP01375 AL137100.1-201ENST00000556703 1620 ntBASIC4.58□□□□□ -1.68
TNFP01375 AL132656.3-201ENST00000606384 1595 ntBASIC4.58□□□□□ -1.68
TNFP01375 MTCO1P7-201ENST00000419523 1542 ntBASIC4.58□□□□□ -1.68
TNFP01375 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.58□□□□□ -1.68
TNFP01375 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.58□□□□□ -1.68
TNFP01375 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TNFP01375 MIR129-1-201ENST00000384972 72 ntBASIC4.58□□□□□ -1.68
TNFP01375 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.58□□□□□ -1.68
TNFP01375 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.58□□□□□ -1.68
TNFP01375 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.58□□□□□ -1.68
TNFP01375 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.58□□□□□ -1.68
TNFP01375 MTND4LP2-201ENST00000502312 285 ntBASIC4.58□□□□□ -1.68
TNFP01375 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TNFP01375 AC108043.1-201ENST00000512696 574 ntBASIC4.58□□□□□ -1.68
TNFP01375 RNA5SP230-201ENST00000517039 122 ntBASIC4.58□□□□□ -1.68
TNFP01375 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.58□□□□□ -1.68
TNFP01375 AP001781.1-201ENST00000530977 207 ntBASIC4.58□□□□□ -1.68
TNFP01375 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.58□□□□□ -1.68
TNFP01375 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.58□□□□□ -1.68
TNFP01375 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TNFP01375 AC087477.6-201ENST00000559595 843 ntBASIC4.58□□□□□ -1.68
TNFP01375 MIR4277-201ENST00000578298 84 ntBASIC4.58□□□□□ -1.68
TNFP01375 AP005119.2-201ENST00000579735 1105 ntBASIC4.58□□□□□ -1.68
TNFP01375 RPL12P25-202ENST00000598100 674 ntBASIC4.58□□□□□ -1.68
TNFP01375 AL034374.2-201ENST00000605281 548 ntBASIC4.58□□□□□ -1.68
TNFP01375 AC100847.1-201ENST00000611316 481 ntBASIC4.58□□□□□ -1.68
TNFP01375 AL133243.1-201ENST00000614487 366 ntBASIC4.58□□□□□ -1.68
TNFP01375 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TNFP01375 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TNFP01375 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TNFP01375 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
TNFP01375 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
TNFP01375 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TNFP01375 OR14L1P-202ENST00000641545 3009 ntBASIC4.57□□□□□ -1.68
TNFP01375 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
TNFP01375 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms