Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNA5SP34-201ENST00000516887 130 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS4BO75351 OR5AK3P-201ENST00000527486 1297 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 AP000648.1-201ENST00000529682 397 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 OR11H3P-201ENST00000554547 982 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 AC044860.2-201ENST00000561005 179 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS4BO75351 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS4BO75351 AC002069.2-201ENST00000603580 883 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS4BO75351 AL031601.1-201ENST00000605702 394 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS4BO75351 AC007349.4-201ENST00000608114 532 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 AL021918.2-201ENST00000613415 194 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS4BO75351 OR1S1-201ENST00000624470 978 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS4BO75351 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS4BO75351 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VPS4BO75351 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS4BO75351 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS4BO75351 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS4BO75351 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
VPS4BO75351 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
VPS4BO75351 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.52
VPS4BO75351 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
VPS4BO75351 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
VPS4BO75351 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4BO75351 VN2R3P-201ENST00000422626 1412 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS4BO75351 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS4BO75351 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS4BO75351 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS4BO75351 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4BO75351 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4BO75351 METTL21EP-201ENST00000298105 713 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4BO75351 MIR375-201ENST00000362103 64 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 RNU6-1214P-201ENST00000363650 109 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 RNU1-87P-201ENST00000363727 170 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 Y_RNA.578-201ENST00000390903 88 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 FCF1P5-201ENST00000406490 482 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 AP000534.2-201ENST00000412729 568 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS4BO75351 ELOCP9-201ENST00000418624 239 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS4BO75351 FO393419.3-201ENST00000428741 282 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS4BO75351 VN1R110P-201ENST00000438988 971 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 AL512605.1-202ENST00000441919 381 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 AP000281.1-201ENST00000444036 316 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS4BO75351 MED28P3-201ENST00000444288 531 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 AL359955.2-201ENST00000445380 353 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS4BO75351 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS4BO75351 PSMC1P13-201ENST00000458195 985 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 AC010468.1-201ENST00000461022 817 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 PSAT1P4-201ENST00000466500 526 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4BO75351 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS4BO75351 AC023050.1-201ENST00000498198 304 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4BO75351 AC010486.2-201ENST00000505572 483 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 OR5M14P-201ENST00000506803 618 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 RNU6-1004P-201ENST00000516584 111 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 AC137627.1-201ENST00000545761 289 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.58□□□□□ -1.52
VPS4BO75351 AC125611.1-201ENST00000549563 229 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS4BO75351 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS4BO75351 SNORD39.2-201ENST00000579995 76 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 AP005119.1-201ENST00000580956 292 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 AC069366.1-201ENST00000583159 838 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS4BO75351 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS4BO75351 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4BO75351 AC091057.2-201ENST00000602594 792 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 AL020997.3-201ENST00000602843 359 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 AC005252.1-201ENST00000604518 1063 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4BO75351 AL136131.3-201ENST00000607600 188 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 AL139407.1-201ENST00000613826 1175 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 MIR6133-201ENST00000617057 108 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS4BO75351 AC011815.3-201ENST00000624194 473 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 AL121594.5-201ENST00000631724 573 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 MIR193BHG-214ENST00000641765 509 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS4BO75351 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS4BO75351 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4BO75351 ZNF733P-202ENST00000444809 1573 ntBASIC5.58□□□□□ -1.52
VPS4BO75351 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4BO75351 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4BO75351 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4BO75351 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4BO75351 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
VPS4BO75351 AC107021.2-201ENST00000567714 2095 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4BO75351 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms