Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.79□□□□□ -1.64
ZIC3O60481 EEF1A1P37-201ENST00000522748 715 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ZIC3O60481 OR8K4P-201ENST00000534608 872 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.79□□□□□ -1.64
ZIC3O60481 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.79□□□□□ -1.64
ZIC3O60481 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.79□□□□□ -1.64
ZIC3O60481 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ZIC3O60481 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.79□□□□□ -1.64
ZIC3O60481 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.79□□□□□ -1.64
ZIC3O60481 MTCYBP23-201ENST00000558717 1102 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.79□□□□□ -1.64
ZIC3O60481 OR7E18P-201ENST00000592589 702 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.79□□□□□ -1.64
ZIC3O60481 VN1R87P-201ENST00000596706 487 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 AL049844.2-201ENST00000604280 628 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 AC073387.2-201ENST00000604797 784 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 AC010632.3-201ENST00000611377 369 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
ZIC3O60481 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.79□□□□□ -1.64
ZIC3O60481 AC119674.1-212ENST00000641155 993 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.79□□□□□ -1.64
ZIC3O60481 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZIC3O60481 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ZIC3O60481 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
ZIC3O60481 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZIC3O60481 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZIC3O60481 MTCO1P18-201ENST00000455518 1419 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
ZIC3O60481 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZIC3O60481 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.78□□□□□ -1.64
ZIC3O60481 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.78□□□□□ -1.64
ZIC3O60481 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.78□□□□□ -1.64
ZIC3O60481 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.78□□□□□ -1.64
ZIC3O60481 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
ZIC3O60481 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZIC3O60481 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ZIC3O60481 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.78□□□□□ -1.64
ZIC3O60481 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
ZIC3O60481 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.78□□□□□ -1.64
ZIC3O60481 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZIC3O60481 C4BPAP1-201ENST00000415474 1893 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZIC3O60481 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.78□□□□□ -1.64
ZIC3O60481 RN7SKP145-201ENST00000363291 303 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 RNU1-19P-201ENST00000363306 165 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZIC3O60481 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZIC3O60481 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ZIC3O60481 U6.112-201ENST00000384129 70 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 MIR137-201ENST00000385223 102 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 RNU6-1320P-201ENST00000390838 107 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 RNU6-932P-201ENST00000391108 106 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 RNU6-1269P-201ENST00000391139 107 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 RN7SKP199-201ENST00000410325 305 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 AL592310.1-201ENST00000414330 671 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ZIC3O60481 BMS1P13-201ENST00000417301 885 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 OSTCP5-201ENST00000425293 453 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 RPL5P2-201ENST00000429598 854 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 AC124944.2-201ENST00000429866 1242 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.78□□□□□ -1.64
ZIC3O60481 YWHAZP2-201ENST00000440317 728 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 ARAFP2-201ENST00000440565 559 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 EEF1B2P5-201ENST00000444820 548 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 MTND2P8-201ENST00000450555 1025 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.78□□□□□ -1.64
ZIC3O60481 DNAJB5P1-201ENST00000454004 806 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 Z92846.1-201ENST00000456203 268 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 RNU6-599P-201ENST00000459383 107 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 RNU6-1193P-201ENST00000459461 107 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.78□□□□□ -1.64
ZIC3O60481 AC005532.2-201ENST00000467154 373 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 AP000797.2-201ENST00000475768 606 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.78□□□□□ -1.64
ZIC3O60481 AC068587.2-201ENST00000478386 781 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 SNRPCP2-201ENST00000504370 475 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.78□□□□□ -1.64
ZIC3O60481 AC008638.1-201ENST00000506035 866 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.78□□□□□ -1.64
ZIC3O60481 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.78□□□□□ -1.64
ZIC3O60481 AC022360.1-201ENST00000521058 340 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ZIC3O60481 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.78□□□□□ -1.64
ZIC3O60481 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.78□□□□□ -1.64
ZIC3O60481 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.78□□□□□ -1.64
ZIC3O60481 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ZIC3O60481 OR11J2P-201ENST00000555298 907 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 ZNF971P-201ENST00000562068 1249 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.78□□□□□ -1.64
ZIC3O60481 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.78□□□□□ -1.64
ZIC3O60481 AC095055.1-201ENST00000603472 1113 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 AL450336.1-201ENST00000605180 586 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 AC106052.1-201ENST00000608029 497 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 AL135786.2-201ENST00000608422 615 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.78□□□□□ -1.64
ZIC3O60481 SDR42E1P1-201ENST00000611327 477 ntBASIC4.78□□□□□ -1.64
ZIC3O60481 AC016769.4-201ENST00000616893 535 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 423.8 ms