Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RANP1-206ENST00000455094 651 ntBASIC4.82□□□□□ -1.64
SSX4O60224 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX4O60224 RPL7AP10-201ENST00000481016 791 ntBASIC4.82□□□□□ -1.64
SSX4O60224 RN7SL570P-201ENST00000484405 292 ntBASIC4.82□□□□□ -1.64
SSX4O60224 UBA52P7-201ENST00000486088 380 ntBASIC4.82□□□□□ -1.64
SSX4O60224 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.82□□□□□ -1.64
SSX4O60224 OR5H3P-201ENST00000502817 919 ntBASIC4.82□□□□□ -1.64
SSX4O60224 AC002456.2-201ENST00000509356 380 ntBASIC4.82□□□□□ -1.64
SSX4O60224 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.82□□□□□ -1.64
SSX4O60224 EIF4A2P5-201ENST00000529914 499 ntBASIC4.82□□□□□ -1.64
SSX4O60224 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX4O60224 GLRXP2-201ENST00000555594 321 ntBASIC4.82□□□□□ -1.64
SSX4O60224 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.82□□□□□ -1.64
SSX4O60224 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.82□□□□□ -1.64
SSX4O60224 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
SSX4O60224 AC018552.1-201ENST00000562099 811 ntBASIC4.82□□□□□ -1.64
SSX4O60224 AC096996.1-201ENST00000563813 325 ntBASIC4.82□□□□□ -1.64
SSX4O60224 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.82□□□□□ -1.64
SSX4O60224 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.82□□□□□ -1.64
SSX4O60224 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.82□□□□□ -1.64
SSX4O60224 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.82□□□□□ -1.64
SSX4O60224 IMMP1LP3-201ENST00000604197 224 ntBASIC4.82□□□□□ -1.64
SSX4O60224 AC010245.2-201ENST00000606908 1167 ntBASIC4.82□□□□□ -1.64
SSX4O60224 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.82□□□□□ -1.64
SSX4O60224 AC018645.2-201ENST00000609151 472 ntBASIC4.82□□□□□ -1.64
SSX4O60224 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.82□□□□□ -1.64
SSX4O60224 AC011472.4-201ENST00000615848 491 ntBASIC4.82□□□□□ -1.64
SSX4O60224 AL138955.1-201ENST00000622881 1040 ntBASIC4.82□□□□□ -1.64
SSX4O60224 AC018445.2-201ENST00000622987 260 ntBASIC4.82□□□□□ -1.64
SSX4O60224 AC015871.5-202ENST00000623252 701 ntBASIC4.82□□□□□ -1.64
SSX4O60224 AC010872.1-201ENST00000624225 675 ntBASIC4.82□□□□□ -1.64
SSX4O60224 TMEM30CP-203ENST00000637814 1035 ntBASIC4.82□□□□□ -1.64
SSX4O60224 CASC19-264ENST00000641912 1184 ntBASIC4.82□□□□□ -1.64
SSX4O60224 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX4O60224 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.82□□□□□ -1.64
SSX4O60224 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
SSX4O60224 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.82□□□□□ -1.64
SSX4O60224 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SSX4O60224 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX4O60224 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSX4O60224 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.82□□□□□ -1.64
SSX4O60224 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX4O60224 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSX4O60224 AL731566.1-201ENST00000620490 1937 ntBASIC4.82□□□□□ -1.64
SSX4O60224 MUC2-202ENST00000613187 4845 ntBASIC4.81□□□□□ -1.64
SSX4O60224 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSX4O60224 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
SSX4O60224 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSX4O60224 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SSX4O60224 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.81□□□□□ -1.64
SSX4O60224 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSX4O60224 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSX4O60224 AC008432.1-201ENST00000615912 1320 ntBASIC4.81□□□□□ -1.64
SSX4O60224 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSX4O60224 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSX4O60224 RNA5SP131-201ENST00000365452 119 ntBASIC4.81□□□□□ -1.64
SSX4O60224 RNU4-2-201ENST00000365668 141 ntBASIC4.81□□□□□ -1.64
SSX4O60224 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSX4O60224 RNU4-31P-201ENST00000384211 141 ntBASIC4.81□□□□□ -1.64
SSX4O60224 VDAC2P1-201ENST00000399358 958 ntBASIC4.81□□□□□ -1.64
SSX4O60224 AC233289.1-201ENST00000403700 508 ntBASIC4.81□□□□□ -1.64
SSX4O60224 GAPDHP42-201ENST00000406848 981 ntBASIC4.81□□□□□ -1.64
SSX4O60224 RNA5SP498-201ENST00000411342 120 ntBASIC4.81□□□□□ -1.64
SSX4O60224 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.81□□□□□ -1.64
SSX4O60224 RPSAP35-201ENST00000413753 818 ntBASIC4.81□□□□□ -1.64
SSX4O60224 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.81□□□□□ -1.64
SSX4O60224 AC007394.1-201ENST00000421941 531 ntBASIC4.81□□□□□ -1.64
SSX4O60224 NPM1P22-201ENST00000427761 952 ntBASIC4.81□□□□□ -1.64
SSX4O60224 MTND2P2-201ENST00000434633 945 ntBASIC4.81□□□□□ -1.64
SSX4O60224 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.81□□□□□ -1.64
SSX4O60224 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.81□□□□□ -1.64
SSX4O60224 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSX4O60224 OR7E116P-201ENST00000448529 957 ntBASIC4.81□□□□□ -1.64
SSX4O60224 AL591623.2-201ENST00000449978 222 ntBASIC4.81□□□□□ -1.64
SSX4O60224 AL591363.1-201ENST00000450091 483 ntBASIC4.81□□□□□ -1.64
SSX4O60224 CYCSP42-201ENST00000450823 238 ntBASIC4.81□□□□□ -1.64
SSX4O60224 AC090638.1-201ENST00000498296 909 ntBASIC4.81□□□□□ -1.64
SSX4O60224 PPM1AP1-201ENST00000502740 1135 ntBASIC4.81□□□□□ -1.64
SSX4O60224 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.81□□□□□ -1.64
SSX4O60224 HIGD1AP14-201ENST00000507617 282 ntBASIC4.81□□□□□ -1.64
SSX4O60224 AC074255.1-201ENST00000511259 501 ntBASIC4.81□□□□□ -1.64
SSX4O60224 MTCO3P27-201ENST00000514397 196 ntBASIC4.81□□□□□ -1.64
SSX4O60224 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.81□□□□□ -1.64
SSX4O60224 AL109741.3-201ENST00000561748 592 ntBASIC4.81□□□□□ -1.64
SSX4O60224 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.81□□□□□ -1.64
SSX4O60224 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.81□□□□□ -1.64
SSX4O60224 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.81□□□□□ -1.64
SSX4O60224 AC006116.7-201ENST00000590141 756 ntBASIC4.81□□□□□ -1.64
SSX4O60224 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.81□□□□□ -1.64
SSX4O60224 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.81□□□□□ -1.64
SSX4O60224 BNIP3P39-201ENST00000601077 554 ntBASIC4.81□□□□□ -1.64
SSX4O60224 AC133794.1-201ENST00000602731 914 ntBASIC4.81□□□□□ -1.64
SSX4O60224 SUGT1P3-202ENST00000604259 383 ntBASIC4.81□□□□□ -1.64
SSX4O60224 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.81□□□□□ -1.64
SSX4O60224 AL139022.2-201ENST00000606934 443 ntBASIC4.81□□□□□ -1.64
SSX4O60224 AL391834.1-201ENST00000609609 560 ntBASIC4.81□□□□□ -1.64
SSX4O60224 AL049777.1-201ENST00000622740 518 ntBASIC4.81□□□□□ -1.64
SSX4O60224 AC010435.1-201ENST00000623353 1177 ntBASIC4.81□□□□□ -1.64
SSX4O60224 AC011815.3-201ENST00000624194 473 ntBASIC4.81□□□□□ -1.64
SSX4O60224 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms