Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PHGDHO43175 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.57□□□□□ -1.52
PHGDHO43175 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PHGDHO43175 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PHGDHO43175 AL034546.1-201ENST00000623740 3693 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.57□□□□□ -1.52
PHGDHO43175 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PHGDHO43175 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
PHGDHO43175 AL606537.1-201ENST00000607258 2011 ntBASIC5.57□□□□□ -1.52
PHGDHO43175 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PHGDHO43175 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHGDHO43175 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PHGDHO43175 AC006206.1-201ENST00000544842 3387 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
PHGDHO43175 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.56□□□□□ -1.52
PHGDHO43175 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PHGDHO43175 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHGDHO43175 MTND4P31-201ENST00000425607 1343 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AC104446.1-201ENST00000613728 1321 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
PHGDHO43175 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHGDHO43175 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHGDHO43175 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PHGDHO43175 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHGDHO43175 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHGDHO43175 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PHGDHO43175 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.56□□□□□ -1.52
PHGDHO43175 RNY3P9-201ENST00000384727 106 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
PHGDHO43175 AC119751.3-201ENST00000399720 670 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.56□□□□□ -1.52
PHGDHO43175 MIR1203-201ENST00000408812 85 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 RNU6-77P-201ENST00000410554 91 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 SLC20A1P1-201ENST00000413906 956 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 RNF10P1-201ENST00000418589 369 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.56□□□□□ -1.52
PHGDHO43175 AK4P4-201ENST00000419465 646 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AC048351.1-201ENST00000420064 602 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 RPF2P1-201ENST00000424137 906 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.56□□□□□ -1.52
PHGDHO43175 RPS24P8-201ENST00000431490 402 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 RPL7P34-201ENST00000433316 712 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 RPL5P25-201ENST00000441148 775 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 TPTE2P6-202ENST00000445572 1007 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.56□□□□□ -1.52
PHGDHO43175 AC022431.1-201ENST00000450941 438 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.56□□□□□ -1.52
PHGDHO43175 HMGB1P4-201ENST00000455362 567 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 RPS17P15-201ENST00000475609 349 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AC004263.1-201ENST00000479327 332 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AC073522.1-201ENST00000483312 377 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.56□□□□□ -1.52
PHGDHO43175 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.56□□□□□ -1.52
PHGDHO43175 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PHGDHO43175 AC011853.1-201ENST00000518911 454 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.56□□□□□ -1.52
PHGDHO43175 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.56□□□□□ -1.52
PHGDHO43175 AC024405.1-201ENST00000532521 1042 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.56□□□□□ -1.52
PHGDHO43175 AC044913.1-201ENST00000557200 430 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AC026826.3-201ENST00000561747 158 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.56□□□□□ -1.52
PHGDHO43175 MTND4LP24-201ENST00000572277 291 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.56□□□□□ -1.52
PHGDHO43175 MIR4271-201ENST00000582451 67 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AC063977.5-201ENST00000601044 974 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AC091057.2-201ENST00000602594 792 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 DUXAP3-201ENST00000603616 594 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AC092106.3-201ENST00000611308 722 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AC024884.1-201ENST00000620583 399 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AC074140.1-201ENST00000621617 208 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AC073592.6-201ENST00000624271 415 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHGDHO43175 AC000367.1-201ENST00000452711 1766 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHGDHO43175 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PHGDHO43175 SMG1P7-201ENST00000565246 2704 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 AP001029.2-203ENST00000589795 4910 ntBASIC5.56□□□□□ -1.52
PHGDHO43175 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PHGDHO43175 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PHGDHO43175 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PHGDHO43175 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PHGDHO43175 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
PHGDHO43175 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.55□□□□□ -1.52
PHGDHO43175 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.55□□□□□ -1.52
PHGDHO43175 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.55□□□□□ -1.52
PHGDHO43175 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.55□□□□□ -1.52
PHGDHO43175 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHGDHO43175 AL079342.2-201ENST00000403367 482 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms