Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 SCARNA21.2-201ENST00000516600 166 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.94□□□□□ -1.78
SDCBPO00560 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SDCBPO00560 RN7SL176P-201ENST00000580352 264 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.94□□□□□ -1.78
SDCBPO00560 RN7SL753P-201ENST00000581238 290 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.94□□□□□ -1.78
SDCBPO00560 AC091979.2-201ENST00000607514 214 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 OR7A19P-201ENST00000608051 733 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 AC007497.1-201ENST00000610421 561 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 FAM27B-201ENST00000610601 213 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 SDR42E1P1-201ENST00000611327 477 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.94□□□□□ -1.78
SDCBPO00560 AC112694.2-201ENST00000623697 768 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SDCBPO00560 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SDCBPO00560 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SDCBPO00560 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SDCBPO00560 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SDCBPO00560 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SDCBPO00560 INTS6P1-201ENST00000504674 2530 ntBASIC3.93□□□□□ -1.78
SDCBPO00560 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SDCBPO00560 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SDCBPO00560 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC3.93□□□□□ -1.78
SDCBPO00560 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SDCBPO00560 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SDCBPO00560 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SDCBPO00560 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SDCBPO00560 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SDCBPO00560 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SDCBPO00560 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SDCBPO00560 RNU1-82P-201ENST00000390851 165 ntBASIC3.93□□□□□ -1.78
SDCBPO00560 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SDCBPO00560 AL589647.1-201ENST00000402485 466 ntBASIC3.93□□□□□ -1.78
SDCBPO00560 RNA5SP146-201ENST00000410743 123 ntBASIC3.93□□□□□ -1.78
SDCBPO00560 VDAC1P9-201ENST00000412766 841 ntBASIC3.93□□□□□ -1.78
SDCBPO00560 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC3.93□□□□□ -1.78
SDCBPO00560 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.93□□□□□ -1.78
SDCBPO00560 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.93□□□□□ -1.78
SDCBPO00560 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.93□□□□□ -1.78
SDCBPO00560 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.93□□□□□ -1.78
SDCBPO00560 AC073587.1-201ENST00000447093 876 ntBASIC3.93□□□□□ -1.78
SDCBPO00560 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.93□□□□□ -1.78
SDCBPO00560 AC010733.1-201ENST00000451515 401 ntBASIC3.93□□□□□ -1.78
SDCBPO00560 RPL7AP6-201ENST00000477943 801 ntBASIC3.93□□□□□ -1.78
SDCBPO00560 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SDCBPO00560 GAPDHP56-201ENST00000506031 988 ntBASIC3.93□□□□□ -1.78
SDCBPO00560 STMN1P2-201ENST00000508435 439 ntBASIC3.93□□□□□ -1.78
SDCBPO00560 AC134698.5-201ENST00000519444 336 ntBASIC3.93□□□□□ -1.78
SDCBPO00560 BUD31P1-201ENST00000521828 359 ntBASIC3.93□□□□□ -1.78
SDCBPO00560 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.93□□□□□ -1.78
SDCBPO00560 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.93□□□□□ -1.78
SDCBPO00560 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.93□□□□□ -1.78
SDCBPO00560 AC022726.1-201ENST00000587475 207 ntBASIC3.93□□□□□ -1.78
SDCBPO00560 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.93□□□□□ -1.78
SDCBPO00560 AC073575.2-201ENST00000614212 627 ntBASIC3.93□□□□□ -1.78
SDCBPO00560 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SDCBPO00560 AC055839.1-201ENST00000634467 498 ntBASIC3.93□□□□□ -1.78
SDCBPO00560 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SDCBPO00560 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.93□□□□□ -1.78
SDCBPO00560 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SDCBPO00560 AC017104.4-201ENST00000636283 1592 ntBASIC3.93□□□□□ -1.78
SDCBPO00560 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SDCBPO00560 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.92□□□□□ -1.78
SDCBPO00560 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SDCBPO00560 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SDCBPO00560 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SDCBPO00560 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SDCBPO00560 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SDCBPO00560 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.92□□□□□ -1.78
SDCBPO00560 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.92□□□□□ -1.78
SDCBPO00560 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SDCBPO00560 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC3.92□□□□□ -1.78
SDCBPO00560 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SDCBPO00560 RNU1-94P-201ENST00000362627 173 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.92□□□□□ -1.78
SDCBPO00560 U3.30-201ENST00000391308 210 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 AL590762.2-201ENST00000395798 571 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SDCBPO00560 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.92□□□□□ -1.78
SDCBPO00560 RN7SKP247-201ENST00000411094 308 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.92□□□□□ -1.78
SDCBPO00560 PDSS1P1-201ENST00000422953 1114 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.92□□□□□ -1.78
SDCBPO00560 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SDCBPO00560 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.92□□□□□ -1.78
SDCBPO00560 SUMO2P1-206ENST00000445436 284 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 RPL5P16-201ENST00000471467 790 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 RPS4XP14-201ENST00000493072 781 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 AC108022.1-201ENST00000493466 478 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 OR5M14P-201ENST00000506803 618 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.92□□□□□ -1.78
SDCBPO00560 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.92□□□□□ -1.78
SDCBPO00560 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 MORF4L1P3-201ENST00000525966 950 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 AC005000.1-201ENST00000536192 288 ntBASIC3.92□□□□□ -1.78
SDCBPO00560 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.92□□□□□ -1.78
SDCBPO00560 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.92□□□□□ -1.78
SDCBPO00560 EDDM3DP-201ENST00000554692 434 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms