Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC010245.2-201ENST00000606908 1167 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 AC000068.2-201ENST00000608816 460 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
FOXN3O00409 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
FOXN3O00409 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.77□□□□□ -1.49
FOXN3O00409 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.77□□□□□ -1.49
FOXN3O00409 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.77□□□□□ -1.49
FOXN3O00409 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
FOXN3O00409 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
FOXN3O00409 VPS35P1-201ENST00000563400 1518 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
FOXN3O00409 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
FOXN3O00409 HSPA8P17-201ENST00000427029 1382 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
FOXN3O00409 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
FOXN3O00409 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
FOXN3O00409 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
FOXN3O00409 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
FOXN3O00409 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXN3O00409 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
FOXN3O00409 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
FOXN3O00409 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
FOXN3O00409 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXN3O00409 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXN3O00409 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
FOXN3O00409 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
FOXN3O00409 MIR133A2-201ENST00000347538 102 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
FOXN3O00409 RNA5SP234-201ENST00000363916 119 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXN3O00409 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
FOXN3O00409 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.76□□□□□ -1.49
FOXN3O00409 SNORD65C-201ENST00000390962 71 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
FOXN3O00409 AP002530.1-201ENST00000405705 684 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.76□□□□□ -1.49
FOXN3O00409 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.76□□□□□ -1.49
FOXN3O00409 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXN3O00409 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXN3O00409 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXN3O00409 RPL19P16-201ENST00000433839 588 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 AC092170.1-201ENST00000440211 356 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 ARL5AP2-201ENST00000444698 533 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 OR51B8P-201ENST00000449892 769 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXN3O00409 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.76□□□□□ -1.49
FOXN3O00409 RPL7P32-201ENST00000457119 744 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
FOXN3O00409 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXN3O00409 AP000797.2-201ENST00000475768 606 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 RN7SL273P-201ENST00000481561 299 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 PPIAP19-201ENST00000486414 492 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
FOXN3O00409 AC023050.1-201ENST00000498198 304 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXN3O00409 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXN3O00409 AC147055.3-201ENST00000510547 851 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXN3O00409 AC093752.1-206ENST00000511823 336 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXN3O00409 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.76□□□□□ -1.49
FOXN3O00409 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXN3O00409 RN7SL290P-201ENST00000578661 300 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXN3O00409 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.76□□□□□ -1.49
FOXN3O00409 AC006116.5-201ENST00000591936 559 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 AL357094.1-201ENST00000603845 844 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 AL160237.3-201ENST00000604114 1013 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 OR2BH1P-201ENST00000608850 864 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
FOXN3O00409 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 AL356863.1-201ENST00000623378 1080 ntBASIC5.76□□□□□ -1.49
FOXN3O00409 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.76□□□□□ -1.49
FOXN3O00409 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
FOXN3O00409 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.76□□□□□ -1.49
FOXN3O00409 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
FOXN3O00409 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
FOXN3O00409 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
FOXN3O00409 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
FOXN3O00409 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
FOXN3O00409 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
FOXN3O00409 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
FOXN3O00409 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
FOXN3O00409 OR1L6-202ENST00000373684 1044 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.75□□□□□ -1.49
FOXN3O00409 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXN3O00409 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXN3O00409 RPL7P29-201ENST00000437151 728 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 AC092473.1-201ENST00000441098 221 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXN3O00409 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXN3O00409 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
FOXN3O00409 AL031313.1-201ENST00000448435 256 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXN3O00409 RPL35AP19-201ENST00000469425 329 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXN3O00409 TMEM97P2-201ENST00000517841 403 ntBASIC5.75□□□□□ -1.49
FOXN3O00409 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.75□□□□□ -1.49
FOXN3O00409 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms