Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC234775.3-201ENST00000564612 656 ntBASIC5.01□□□□□ -1.61
SMIM28A0A1B0GU29 AC084783.1-201ENST00000565846 910 ntBASIC5.01□□□□□ -1.61
SMIM28A0A1B0GU29 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.01□□□□□ -1.61
SMIM28A0A1B0GU29 AC069061.3-201ENST00000582254 823 ntBASIC5.01□□□□□ -1.61
SMIM28A0A1B0GU29 RPL12P25-202ENST00000598100 674 ntBASIC5.01□□□□□ -1.61
SMIM28A0A1B0GU29 RPL26P30-202ENST00000602923 645 ntBASIC5.01□□□□□ -1.61
SMIM28A0A1B0GU29 AL023583.1-201ENST00000607518 1143 ntBASIC5.01□□□□□ -1.61
SMIM28A0A1B0GU29 AC008833.1-201ENST00000611633 691 ntBASIC5.01□□□□□ -1.61
SMIM28A0A1B0GU29 MIR378J-201ENST00000611988 109 ntBASIC5.01□□□□□ -1.61
SMIM28A0A1B0GU29 MIR6810-201ENST00000622701 70 ntBASIC5.01□□□□□ -1.61
SMIM28A0A1B0GU29 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SMIM28A0A1B0GU29 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.01□□□□□ -1.61
SMIM28A0A1B0GU29 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
SMIM28A0A1B0GU29 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SMIM28A0A1B0GU29 AL137100.1-201ENST00000556703 1620 ntBASIC5.01□□□□□ -1.61
SMIM28A0A1B0GU29 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 PHACTR2P1-201ENST00000605639 1414 ntBASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 AC126755.2-208ENST00000327792 462 ntBASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 AC138969.1-213ENST00000331436 462 ntBASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 SNORA71.2-201ENST00000364941 134 ntBASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 AC016712.1-201ENST00000431088 378 ntBASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 AL157385.1-201ENST00000446973 268 ntBASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 RN7SL860P-201ENST00000473738 223 ntBASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 SUMO2P4-201ENST00000504193 276 ntBASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 AP005901.4-201ENST00000577336 569 ntBASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 AP000432.2-201ENST00000624164 2048 ntBASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5□□□□□ -1.61
SMIM28A0A1B0GU29 AC108467.2-201ENST00000617640 1597 ntBASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 AC135352.1-201ENST00000506173 1418 ntBASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 OR56B2P-202ENST00000641377 2453 ntBASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 RPL12P28-201ENST00000430852 489 ntBASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 RN7SKP5-201ENST00000517045 272 ntBASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 AC034205.1-201ENST00000520621 638 ntBASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 AC138832.1-201ENST00000522871 556 ntBASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 AC015914.2-201ENST00000618167 288 ntBASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 CASC19-255ENST00000641733 1385 ntBASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 AC139713.2-214ENST00000642059 1811 ntBASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.99□□□□□ -1.61
SMIM28A0A1B0GU29 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 AC083843.2-201ENST00000568248 6253 ntBASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 MIR659-201ENST00000384963 97 ntBASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 U3.22-201ENST00000391120 215 ntBASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 OR1F12-201ENST00000402365 945 ntBASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 MTCO3P17-201ENST00000443775 513 ntBASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 TXNP2-201ENST00000443918 295 ntBASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 AC012512.1-201ENST00000446594 718 ntBASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 AL161722.1-201ENST00000446972 1032 ntBASIC4.98□□□□□ -1.61
SMIM28A0A1B0GU29 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms