Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SNORA64.1-201ENST00000362600 132 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 OR2T4-202ENST00000366475 1047 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 HMGN2P8-201ENST00000391458 268 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 FANCL-204ENST00000403676 849 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 RPSAP44-201ENST00000406712 884 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 RN7SKP285-201ENST00000410137 318 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 TRBV29OR9-2-201ENST00000427589 333 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AL022331.1-201ENST00000429025 477 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 RPS29P9-201ENST00000440360 171 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 IGKV1OR-2-201ENST00000457995 350 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 RN7SL213P-201ENST00000463482 317 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC004801.2-202ENST00000463559 283 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC006517.1-201ENST00000480485 328 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AP001086.1-201ENST00000494882 321 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AL035404.1-201ENST00000497982 568 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC093331.1-201ENST00000521474 169 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 HMGN2P36-201ENST00000529541 409 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 MIR4312-201ENST00000579909 76 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 MIR1273F-201ENST00000580581 99 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC005244.1-201ENST00000582566 339 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 MIR1587-201ENST00000583319 53 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC090774.2-201ENST00000584708 322 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC005498.2-201ENST00000590579 326 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC103792.1-201ENST00000603591 919 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC090953.1-201ENST00000604305 1092 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC010201.1-201ENST00000605051 540 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC092653.1-201ENST00000608509 531 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC128687.2-201ENST00000609657 566 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AL627309.1-205ENST00000610542 723 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 HIST1H4L-201ENST00000618305 312 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC243960.7-201ENST00000623532 707 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AL390318.1-201ENST00000624564 687 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AC092079.1-201ENST00000558620 1985 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 ZNF542P-204ENST00000482727 1305 ntBASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC2.35□□□□□ -2.03
LINC01558Q9Y6Z2 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 MFSD8-220ENST00000641243 1422 ntBASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 RMST-202ENST00000541282 2099 ntTSL 2 BASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 AC010132.2-201ENST00000295493 1043 ntBASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 RNA5SP477-201ENST00000362639 119 ntBASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 RNA5SP485-201ENST00000365053 119 ntBASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 U3.15-201ENST00000365398 212 ntBASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 ATP5HP3-201ENST00000396994 486 ntBASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.34□□□□□ -2.03
LINC01558Q9Y6Z2 AC074254.1-201ENST00000399152 404 ntTSL 5 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms