Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF6Q9Y252 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF6Q9Y252 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF6Q9Y252 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RNF6Q9Y252 snoU13.20-201ENST00000459180 104 ntBASIC4.72□□□□□ -1.65
RNF6Q9Y252 AC073073.1-201ENST00000493920 463 ntBASIC4.72□□□□□ -1.65
RNF6Q9Y252 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF6Q9Y252 AC117525.1-201ENST00000515228 503 ntBASIC4.72□□□□□ -1.65
RNF6Q9Y252 BRD9P1-201ENST00000529855 560 ntBASIC4.72□□□□□ -1.65
RNF6Q9Y252 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF6Q9Y252 AC018552.1-201ENST00000562099 811 ntBASIC4.72□□□□□ -1.65
RNF6Q9Y252 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF6Q9Y252 AC022387.2-201ENST00000604050 448 ntBASIC4.72□□□□□ -1.65
RNF6Q9Y252 FAM25E-202ENST00000608562 189 ntBASIC4.72□□□□□ -1.65
RNF6Q9Y252 EIF3FP1-201ENST00000613970 806 ntBASIC4.72□□□□□ -1.65
RNF6Q9Y252 AC091953.3-201ENST00000623220 236 ntBASIC4.72□□□□□ -1.65
RNF6Q9Y252 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF6Q9Y252 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF6Q9Y252 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.72□□□□□ -1.65
RNF6Q9Y252 RLIMP2-201ENST00000427891 1563 ntBASIC4.72□□□□□ -1.65
RNF6Q9Y252 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF6Q9Y252 AC083843.3-201ENST00000623679 2186 ntBASIC4.72□□□□□ -1.65
RNF6Q9Y252 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF6Q9Y252 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF6Q9Y252 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RNF6Q9Y252 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF6Q9Y252 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF6Q9Y252 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF6Q9Y252 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNF6Q9Y252 RBPJP2-201ENST00000618187 1444 ntBASIC4.72□□□□□ -1.65
RNF6Q9Y252 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
RNF6Q9Y252 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF6Q9Y252 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF6Q9Y252 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF6Q9Y252 SOCS5P3-201ENST00000425115 1576 ntBASIC4.71□□□□□ -1.66
RNF6Q9Y252 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF6Q9Y252 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 RNU6-670P-201ENST00000364312 104 ntBASIC4.71□□□□□ -1.66
RNF6Q9Y252 SNORA56-201ENST00000383966 129 ntBASIC4.71□□□□□ -1.66
RNF6Q9Y252 RNU1-74P-201ENST00000384108 171 ntBASIC4.71□□□□□ -1.66
RNF6Q9Y252 MTND4LP13-201ENST00000425022 298 ntBASIC4.71□□□□□ -1.66
RNF6Q9Y252 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 RPS26P4-201ENST00000431743 355 ntBASIC4.71□□□□□ -1.66
RNF6Q9Y252 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 NPM1P33-201ENST00000438918 872 ntBASIC4.71□□□□□ -1.66
RNF6Q9Y252 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 CCRL1P1-201ENST00000449542 1053 ntBASIC4.71□□□□□ -1.66
RNF6Q9Y252 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 AC104634.1-201ENST00000452720 462 ntBASIC4.71□□□□□ -1.66
RNF6Q9Y252 AC069277.2-201ENST00000454211 432 ntBASIC4.71□□□□□ -1.66
RNF6Q9Y252 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 RN7SL591P-201ENST00000496150 292 ntBASIC4.71□□□□□ -1.66
RNF6Q9Y252 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 GTF2F2P1-201ENST00000511083 675 ntBASIC4.71□□□□□ -1.66
RNF6Q9Y252 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.71□□□□□ -1.66
RNF6Q9Y252 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 OR4V1P-201ENST00000525394 1140 ntBASIC4.71□□□□□ -1.66
RNF6Q9Y252 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 CR383656.6-201ENST00000550518 394 ntBASIC4.71□□□□□ -1.66
RNF6Q9Y252 PCNPP1-201ENST00000552501 511 ntBASIC4.71□□□□□ -1.66
RNF6Q9Y252 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 MTATP6P25-201ENST00000574491 261 ntBASIC4.71□□□□□ -1.66
RNF6Q9Y252 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF6Q9Y252 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF6Q9Y252 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF6Q9Y252 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF6Q9Y252 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF6Q9Y252 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF6Q9Y252 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RNF6Q9Y252 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF6Q9Y252 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF6Q9Y252 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RNF6Q9Y252 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF6Q9Y252 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF6Q9Y252 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF6Q9Y252 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF6Q9Y252 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF6Q9Y252 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF6Q9Y252 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF6Q9Y252 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RNF6Q9Y252 RNA5SP123-201ENST00000363244 119 ntBASIC4.7□□□□□ -1.66
RNF6Q9Y252 RNU6-1251P-201ENST00000364502 107 ntBASIC4.7□□□□□ -1.66
RNF6Q9Y252 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF6Q9Y252 SNORA51.8-201ENST00000384234 132 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms